Thamnophis sirtalis (common garter snake): 106545863
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Entry
106545863 CDS
T06107
Symbol
TDRD6
Name
(RefSeq) tudor domain-containing protein 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106545863 (TDRD6)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106545863 (TDRD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Tudor_krimper_1st
SMN_Tudor
DUF7077
Motif
Other DBs
NCBI-GeneID:
106545863
NCBI-ProteinID:
XP_013918024
UniProt:
A0A6I9XPS3
LinkDB
All DBs
Position
Unknown
AA seq
2113 aa
AA seq
DB search
MKDLQIKVGPRLANSPGDRGGRGDGDNDGEALALGDLCLVELGGRWHRCRIVGCRSKPAQ
NYRVFLLDEGRTLSASSYYLARGRSELFHLPSEVMGCIIADLLPPGDFGASLKTTLRSSK
SPLGSQTLNLQWGAEAIDFLGFLHGKEVSGVIRKVLISQCLVVLEVPWLLTQMRHLGLAS
LASTAFGTLLSAILEVPEIASVPLEPASTLSKSPVPPSAAQSKQGHVTADFFYPQLELNV
TVPVVVTQISDPYRIYCQLRSLSKEIQLLSDAMYQAFEVSKGEFVEEALPTPGSPCAAHG
IDGCWYRTLLLETYPADDQEDQPEAVAQVICVDYGRKEFVTKRHLRNLPVEYFRMPVVTY
PCSLQGITDGGCGWTHSQINQLKTLLLGKVVQAHIEAYCPFEHIYYITLYGEDGLNLNCL
YGVQAHCLAQNLLHSNQECTSGLIVESESLGVSVQKESASLSEILPTIAATPFFDVRLKA
GEYHNVQVSFLQDPSEFWVQLQELKHPLCHLQRNLRDFYSRSKKLECILLEPKVGSLCCV
MLKENSYHRALVTKVQGKGIVVYLVDWGNTEVVDLYKVKKLLPQFRELPAVAVRCALDKT
FPGQPWNAEAADYFRKSVLNKELVIKVLGMQGDVYIVELFDNSLVGEKNLAKIMSQRKYT
KHHEVLDTLQAISDRLLAGDPDSKPMRLRPVKKISVTDEVKHPQQHDSSAFSAAEMLRNE
HHSSEGTFYSSSALSGSDTSSCEIQNYSEIKAGEEQLEFGSTVDVIVTHIENPSHFWCRL
FKNSHELNMLMSKIQDYCIQSAELHEWPSSVCLAKSSEDKKWYRAVIINKIHYPEEVEVA
YVDYGNKKHVSLKNIRATTADFLKLKAQAFRCSLYNLIQPKHTNPFVWDKKAIETFHEFV
NSGSKVSLKCIIFALAALNGTELFNIVDLITPFESACHFLIRKSLATFVHREKPLASSVQ
LLSYYYSTHNIKRGNEEIIYVTHINSPCFFFCQLARNASALQNLTSNISKVSKTNNLQTS
PNSRNLYLAKYTDDCWYRAIVTSKNDSKEVFFVDFGNTQLLKNEDLVVVPNDAYELMLLP
MQAIKCSLSDIVDPPKDAIEWFEKAVLDKPLKALIVAKDPDGTLIIELYDGKMQINAKLK
QSLGLQTSKEIAENTENSTLSSQYSVSIEENSERGLASVDFVKPVLDGNTKSSAVFGETC
QLQQKTEKVVARKFPEFTDGSSTSNDVEDWKDMKCATLHKKEERCDIRNTSKSVTYSPKN
IYELPQKSIKPGFKSLVYVSHINKLSDFYVQLVEDEPILDSISEKINSSKTISSLVGQQL
NVGDLICAIYSEDGLWYRAVIIKESTSELVEVRYIDYGNTAVVSIHKTCKLIEDCLSFPV
MSIHCMLGSIKTSEIPEWTQKAVVYFSQKTSDVQMNCQFVEKVKGKWEITLSDEKDDIMV
DMINSCLEYKKYDLIETSEKGSYKIGKVSLCEDILSDEHSILSASKSFFWKTPKIGETIK
AFSLVPKNPGYFWCQFTENDISSIEIKLQEAEENAKIHIDDLENGSPCLAKSSDNLFHRA
VVSHIEENSLTVINIDYGTEKHVSIEVIRQIPDELLIIPPQAFLCCLFGFDSEKGSWDEG
INEIFCGMIADLPLEITIMDKLNYDSFEIPLFVVKLEYQNISINEQMKHFWKHHAESGDS
TIVNNCNLEERIRNPEEENSKSVLFETETSVCTTTPKNSSLEDVLCCPNILQSDKCFGVE
DRILSETSVQPFKNQIKHHFISHEIFHTGNQRPTFEAFNNETNYSVSGNRKNITDSTGLS
EIQLSTCKIEYDTLESQEEAEDKEILMLDSSEIQLPLDDTKSLSDFAPLQVLPQLNNAKN
MPEKEKLKMPLLQPKTIEIKTYDETQKKSELHVLEHVEGQSAHKVKENTSLMNENENVIV
EVMASEAFPLLTEKGSNNMLCLQHPALSVPADNKMQSSFSEIKVKPQEFCSIEGLAEECK
LGKSDKPNFTEGQTVLGKNYEEMHLSIHGSFKDSICVEKDYLTNIQLSEVDEPFIHDTEK
KENFCNLMGFDIGSQCMVWSGTQWYKAEILGISPEGTKVLNFSNGNEEIVNPIHVWNGIP
ELDSDLTQVYFPK
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacctccagatcaaagtagggccccgcttggcgaactccccgggggaccgcggg
ggtcgaggagacggcgacaacgacggcgaagccttggctctgggtgacctgtgcctggtg
gagctgggagggcggtggcaccgctgccgtatcgtcggctgccggtccaagccggcgcaa
aactaccgcgtctttctgctggacgagggccgcacgctgagcgccagctcctactatttg
gcgcggggccgcagtgagctcttccacttaccttccgaagtaatgggatgcatcattgct
gacttgctcccacccggcgatttcggggcatccttaaagaccactcttaggagctcaaag
tccccgctaggatcccagacacttaacttacaatggggggctgaggcaatcgattttttg
ggttttttacatggcaaagaggtgtcgggcgtcatccggaaagtgctgatctcacagtgc
cttgtggtactggaagtgccctggttgctgacacagatgcgccatcttgggcttgccagt
cttgcctctactgcttttggcaccctactgagtgccattttagaagttccagagattgct
tctgtcccattggagccagcttccactttgtccaaatccccagtccctccttctgctgcc
cagtccaagcagggtcatgtcacagcagatttcttctatcctcaactggagttgaatgtg
actgtgcctgtggtggtgactcagatctctgatccgtatagaatatattgccagctacgt
agtctttctaaagaaatccaactactttcagatgctatgtaccaagcttttgaggtatca
aagggagaatttgtagaagaggctttacccaccccaggctctccctgtgcagcccacggt
atagatggatgctggtatcgaactttgttattagaaacatacccagcagatgatcaagag
gatcaaccggaggcagtggctcaagtgatttgtgtggattatggcaggaaagagtttgta
acaaagagacatctgcgcaacttacctgttgaatatttccgcatgccagtagtaacctac
ccttgctcgctgcaaggtattactgatggaggttgtggctggacccattcacaaattaat
caacttaaaacattgcttttgggcaaggtagtgcaagctcacatcgaagcttactgtcct
tttgagcatatctattatattactctatatggggaagatggtctcaaccttaattgcctg
tatggggtgcaggcacattgcctggctcaaaatctcctgcacagtaatcaagaatgcacc
tctggtttaattgttgaatcagaaagcttgggtgtctcagtccaaaaggaatctgcttct
ttgtcagagatattgcctactattgctgctaccccattttttgatgtgcgcctgaaggca
ggcgagtaccataatgttcaggtgtcatttcttcaggacccttcagaattctgggtgcag
ttgcaggaacttaaacatccactttgtcacctacagcggaacttaagagacttttattct
cggagtaagaaactagaatgtattctacttgagcccaaggtaggatccctctgctgtgtc
atgttgaaggaaaactcttatcatcgtgcccttgttactaaagttcaagggaaaggaatt
gtggtgtatttggtggattggggaaacactgaagtagttgacttgtataaggtgaagaaa
ttgcttccccaattcagagaacttcctgctgtggcagtccggtgtgcactggataaaact
ttcccaggtcagccatggaacgcagaagctgctgattattttaggaaatctgtgctaaac
aaggaattggtgatcaaagttctaggtatgcaaggagatgtttatatagttgaacttttt
gataattctctagtgggagaaaaaaatttggctaaaatcatgtcccagagaaagtacaca
aagcaccatgaagtactagacactctccaggcaatatcagataggctattggcaggggac
cctgacagtaaaccaatgaggttaagacctgtaaaaaaaatatcagtgacagatgaagta
aaacatccacaacaacatgattcttcagccttttctgcagctgaaatgttgagaaatgaa
caccactccagtgagggaactttttattcttcatcagctctcagtggcagtgatacttca
tcatgtgagatacagaactattctgaaataaaggcaggtgaagaacagcttgaatttgga
agtacagttgatgtgattgtaacacacatagaaaatcctagtcatttttggtgtcgatta
tttaagaattcccatgaactgaatatgcttatgtctaaaattcaggattattgtatacaa
tcagcagagcttcatgaatggccaagttcggtatgtttggctaagtcttctgaggataaa
aaatggtacagagctgttatcattaataagattcattacccagaagaagttgaagtcgct
tatgttgattatggaaataaaaagcatgtttcactgaaaaatatccgtgcaactacagca
gactttctgaagctaaaagctcaagcttttagatgtagcctttacaatttaattcagcca
aaacatacaaatccttttgtttgggataaaaaagccatcgaaacattccatgaatttgtg
aattcaggatctaaagtgtcactgaaatgtattatatttgctttagcagcattaaatggt
acagaactttttaatattgttgaccttattactccttttgaaagtgcttgccatttttta
ataagaaagagtctagccacatttgtacacagagagaaacccttggcatcatctgttcaa
cttctatcgtactattactcaacccacaatatcaaaagaggaaatgaagagattatttat
gtcacacatattaatagcccatgtttttttttctgccagcttgctaggaatgcaagtgct
cttcaaaatttaactagtaacattagtaaagtaagcaaaacaaacaatttgcaaacttca
cccaactctagaaatttgtatcttgcaaagtatactgatgactgctggtatagggctata
gtaacttcaaaaaatgatagcaaagaagttttctttgtagattttgggaatacacaatta
ttaaaaaatgaagatctggttgtagtaccaaatgatgcttacgagttaatgcttttgcct
atgcaagctataaaatgttctctctctgatattgttgatccaccaaaagatgctattgag
tggtttgaaaaggcagtgttggataagcccttaaaagctttgattgtagcaaaagatcct
gatggaacattgataattgaattatatgatggtaaaatgcagatcaatgcaaaattgaaa
caaagcttaggtttgcagactagcaaagagattgctgaaaacacagaaaacagtactcta
tcttcccaatactcagttagtatagaagaaaacagtgaaagaggactagcttcggtagac
tttgtcaaacctgttcttgacggcaatactaaatctagtgctgtttttggagaaacatgc
caattgcagcagaaaactgaaaaagtggtagcaagaaaattcccagaattcacagacggc
tctagcacaagtaatgatgtggaagattggaaggacatgaaatgtgcaacccttcataag
aaagaggagagatgtgatattagaaatacatcaaaatctgtaacatattctcctaaaaat
atatatgaactacctcaaaaaagcataaaacctggttttaaatctttagtgtatgtttct
cacataaataagctttctgatttttatgtacaattagtagaagatgagcctatccttgat
agcatatcggagaaaataaacagctctaaaaccatttcaagcttagtggggcaacagctt
aatgtaggagatttaatatgtgcaatttattcagaagatggcttatggtatcgagctgta
attattaaagagtctactagtgaattggtagaggtacggtatattgattatggcaatact
gcagtagttagcattcataaaacatgcaaacttattgaagactgtttgtctttccctgta
atgagcatccattgtatgctgggtagtattaagacgtcagagattccagaatggacacaa
aaagcagtggtgtatttctcccaaaagacaagcgatgttcagatgaactgtcaatttgtt
gagaaagtaaaaggcaaatgggaaataacactcagtgatgaaaaagatgatataatggtt
gatatgattaatagttgccttgaatataaaaaatatgacctaatagagacatctgagaaa
ggatcttataagattggcaaagtaagtttatgtgaagatattctttctgatgagcacagc
atactttcagctagcaaatcgtttttctggaagacacctaagataggtgaaactataaaa
gccttttcattagttccaaagaatccaggatatttttggtgtcagttcactgaaaatgat
attagttcaattgaaataaaacttcaggaagctgaagaaaatgcaaaaatccacattgat
gatcttgaaaatggcagtccttgtctagcaaagtctagtgataatttatttcaccgagca
gttgttagccatatagaggaaaattccttgacagtaattaacattgattatggaactgag
aaacatgtcagcatagaagtgatcaggcaaattcctgatgaattgttaataattccacca
caagcatttttgtgttgtctctttggctttgattctgaaaaaggttcatgggatgaagga
ataaatgaaattttctgtggtatgatagctgatcttccattagagattacaattatggac
aaactgaactatgattcttttgaaattcccttgtttgtagttaaattggagtatcaaaat
ataagcatcaatgaacaaatgaaacacttttggaaacatcatgctgaaagtggtgattcc
actattgtaaataattgcaaccttgaagagcggattagaaatccagaagaagagaattca
aaatcagtgctatttgaaactgaaacttctgtttgtacaacgacccccaaaaatagtagt
ttggaagatgtattatgttgtccaaatatattacaatcagacaagtgttttggtgtcgaa
gacaggattttatcagaaacatctgtacagccattcaaaaatcaaatcaagcaccacttt
atctcccatgaaatatttcatacagggaaccagcggcccacatttgaggcatttaataat
gaaacaaactattctgtatctggaaacagaaaaaatataacagactctacaggtctttct
gaaatacagctttctacttgtaaaattgaatatgatacacttgaatctcaggaagaagca
gaggacaaagaaatattaatgctagactcttctgaaattcagttgcctttggatgataca
aagagcttgtcagactttgcgcccttacaagtgcttccccaattaaataatgcaaagaat
atgccagaaaaagagaagttaaaaatgcccttgctacagccaaagacaatagaaataaaa
acttatgatgaaacacaaaagaagtcagaattgcatgtacttgagcatgtggaaggacag
tcagcacacaaagtaaaagagaatacttcactaatgaacgaaaatgaaaatgtaatagta
gaagtgatggcatctgaagcgtttcctttactgactgagaaaggcagcaataatatgtta
tgtttgcaacatcctgctttgtctgttcctgcagataataaaatgcagtcatcattttca
gaaattaaagttaagccacaggaattctgttccattgaaggtcttgctgaagagtgtaaa
ctgggaaaaagcgacaagcccaattttacagaaggtcaaactgtgttaggaaagaattat
gaagaaatgcatctgagcattcatggaagttttaaagatagtatttgtgttgaaaaggat
tatctaacaaatatacagctaagtgaagtggatgaacccttcatacatgatacagaaaaa
aaagaaaacttttgcaacttaatgggatttgatattggttcccaatgcatggtatggtca
ggtactcagtggtacaaggctgagattttaggcatatctcctgaaggtacaaaggttttg
aatttttccaatggaaatgaagagatagtcaatcctatacatgtttggaatgggattcct
gaattggattcagaccttactcaggtatattttccaaaatag
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integrated database retrieval system
