Thamnophis sirtalis (common garter snake): 106545892
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Entry
106545892 CDS
T06107
Symbol
PREB
Name
(RefSeq) prolactin regulatory element-binding protein isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106545892 (PREB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106545892 (PREB)
Membrane trafficking [BR:
tsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106545892 (PREB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_SCAP
PEP5_VPS11_N
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
106545892
NCBI-ProteinID:
XP_013918077
UniProt:
A0A6I9XVF9
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MPPRRPPELYRAPFPLYALRIHREAGLALIAGGGGAAKTGITNGLHFLQLDWRDGKLSAS
LLHAHDTETRATMTMALAGNFIAAGQDATCHILRFQLFKSGQKTGGSSGDSAKTGAGDKD
LRRRKAPVPNEKSNGNTHREMTEVAVETLHCVQTDTSPDTLQKAVCFSDDHTLMATGGVD
GFLRVWEFPSMKKTLEFQAHNGEIEDIALGPDNKVVTVGRDFQCCVWQRDQMVTGLRWNE
NLPGIPDKTYRYQSCKFGAVEDQAKALRLYTVQIPYKRERRPLPCYITKWDGHSFLPLLT
RPCGNEVISCLSVSETGTFLGLGTVTGSVAIFVAFSLQRLYYVREAHGIVVTAVAFLPET
PELLKSNEAALLSVAVDSRCRLHQIACRRMFKAGVVDLNVGWESCPANMGSPTNSWLIQC
SFSSQGVSPSGCCCSSVLG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgccccctcgtcggccgcccgagctctaccgggctccgttcccgctctatgccctccgc
atacaccgtgaagctggactggcgctgatcgcggggggaggcggcgccgccaagacgggg
atcacgaatggcttgcatttcttgcagctggactggagagatggcaagttatctgcatcg
ctgctacatgcccatgacacagagacccgggccaccatgactatggcgctggcaggaaat
tttattgctgcagggcaggatgctacttgccacatcctgcgtttccagctctttaaatct
gggcagaaaacaggcggcagcagcggcgatagtgctaaaacaggtgctggtgataaggat
ctacggaggcgcaaggcccctgtccccaatgagaaaagcaatggcaatacacacagggag
atgacggaggtggcagtggaaactttgcactgtgtccaaacagacaccagcccagatact
ctgcagaaagctgtgtgcttcagtgatgatcatactcttatggctactggtggcgtggat
ggtttcctgcgagtctgggagtttcccagcatgaaaaaaactcttgaattccaggcacac
aatggtgagatagaggatatagcactgggtcctgataacaaggtggtgacagtgggacgg
gacttccagtgttgtgtgtggcaacgagatcagatggtgacgggtctgcgttggaatgaa
aatcttccaggcattccagacaagacctaccgctaccagtcttgcaagtttggtgcagtt
gaagaccaagccaaggcattgcggctgtacactgttcaaatcccatacaagcgtgaacga
cgtccgcttccctgctacatcaccaagtgggatggacatagtttcttgcccctgctcact
cgtccctgtggcaatgaggtcatctcatgcctctctgtaagtgagacaggcacattcctg
ggtttgggcactgtcacaggctcggttgccatcttcgtcgccttttctttgcagaggctg
tactacgtgcgggaagcacatggcatagtggtcactgctgtggccttcctgcctgagact
cctgaactgctcaagagcaacgaggcagccctcctaagcgtggcagttgatagccgctgc
cgcctgcaccagattgcctgccggcgtatgttcaaagctggggtggtggatttaaatgtg
ggatgggagtcctgccctgctaatatggggtctcctacaaactcttggttgattcaatgc
tctttctcttcccagggagtttccccatctggctgctgctgctcttctgtgctgggctga
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