Thamnophis sirtalis (common garter snake): 106545934
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Entry
106545934 CDS
T06107
Symbol
OBSL1
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106545934 (OBSL1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
106545934 (OBSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_6
Ig_5
Izumo-Ig
Ig_4
fn3
Motif
Other DBs
NCBI-GeneID:
106545934
NCBI-ProteinID:
XP_013918136
UniProt:
A0A6I9XWI5
LinkDB
All DBs
Position
Unknown
AA seq
1987 aa
AA seq
DB search
MDAFGGAPRFLASPRTFSVQSGTNAILKWQVAGEPRPSIVWEKDGSVLELPSGRMFLEVN
GDAYSLLVSQAGPGDSGRYVCKAKNSVGETYAAALLKVETGSELKPNGDLDCQPPTFLNR
PVSACVTRGEDVTFACRVSGQLEWKKDGRRLSDIFESSHYRMDVEPGDWHSLHIYNTRLP
DAGVYVCRAQNSFGESMAAAVLLVDPVACLPHNDPSQGALQNSHFKKPPESQEDKRHPHH
PARIVLSEGRQNGEVLPSSPPTKSFTVNEGKHAKFRCYVIGKPKPEIVWQKDGKVLSPGR
RHLLYEDREGYFILKVLYCTARDCGLYVCTACNTAGQTLSAVRLHVQEPQLQFQAPLMDV
EVMEHQDAVLECQVPLETMPTTWYLEDKRLQPSPKYLMEEQGLLRRLTVRDARADDDGIY
LCEMEGKGRSIGELSVQGLIVKRLPRKLDVMEGENAAFYVETREPVEAPSWGRNGQELVE
APHTLIRSFGKTHILVLVHVSRHDAGVITFMAGDSQTSAQLRVKCAKRIPPSAPVEVKMC
TRHSNAALLAWCPPPNLHRSPPSSYILERQTVGEAEWVPCLTTDVASMVEVPGDGVPQEA
DYRFRVCSANQYGCSEHVEFPGSVHLVPRAHIKEGLQDVTVCINEDATFSVKLSAPMSGC
WYLSGKRLAKEEEDQQYLIMHSGVSHTLQVKNVQLAANGSEVRFEANGVKESAVLHVQET
PVHIMHCSPEEAHTYLVSERVVLACELSRPNAPVCWYKDGEKVEESQDLLLENEGPHCRL
ILVSAHIQDTGEFVCDAGGDSAFFNITITEPPVQVVCSNADEAHTYWALEQVTLACELSR
PNALVHWYKDGKAVEETEGLRLESEGPHHRLIIASAQVQDTGEFVCDLGGDSVFFTVTVS
DHPVRIIYSNDEESHVYQVAERIELSCELSRPDALVHWYKDGEEVEESEGLLLESEGPHR
RLVIPSAQVKDSGEFVCDAGGDSAFFNITVKEPLVQIVQSNAEATHAYQTSDRVVLTCEL
SCPNAPVQWYKDGEELEEGDGLLFESQGPHRRLVLPFAQVQDTGEFVCDAGDDSAFFNVT
VAEPLVQILQPVERSLEKQVQEFDRLELSCTVSIPDAPVRWFKDGLEVDETHNLLLHAEG
AERCLMILRTSVEDAGEYICETKDESVSFDVMVSESPVKIVQPRRTPSVLKASTGDTVAL
ACVLSHGNAPVHWVKDGVRVEANSGLILEEEGARRCLVIPAAGPEHSGKYICHTLDDTMT
FTLQVSDPPVQIVGRDELQTHHHCLVSEDLVLSITLSCPKGEVKWYKDGEKLQDTERMWL
EQDGTRHSLVISAVEMSDAGEYLCDSGDDSLIFYVMIEVPRLVEIISELHNLTVLEGDDA
IFKVVICPDDVRLNWQLNGQDVVNSERLTITKNGLCHTLTLRQCRLSDTGIVTVCAEGLS
SSGRLSVQEAQVLFVRTLRDLAAEEGQDVRLEVELSVESAEVQWMKQGILLQQNPRLSME
VQGPKRVLTIHQIELADRGTYRCESLHDRTQARLSVEPRKVTVKKPLSDVETLEKETVTF
ELELSHPNVLGVWTRDGIRVKPSSTCQMSATGCVHSLTLQRLMLDDTGTVAFTADTVRSC
ARLTVREPPITMLRLPQDLGIPETGSATFECELSRPLAEVKWYKDGKEIQVSPNCRIYSV
GRRRLLQLNHCSLEDAGEYMCDAGDCHASAKLRIFERQVQIVRELEDVRVQENENAVFIC
EVSLAEVKGEWYNNGERLKVTSTVKIRQEGTRHFLLLSSARPEDTGQVRFVAKTAASEAR
LEVEALPIRIVKPLRDKTVLVRHKATLECTVSQARGRVRWFRGDTEIYAGPKYEICNLDC
YRTLVIHCVEPADEGLYTCDALDDHSTARLLVEAEGIQVVQPLKNVEVMAPFEAQFECEI
SAPSDFTPQWSLNGEELQPGLQVQMESVGHIHKLRFCRTSPNMSGMVKITIGNARSKAHL
TVRGKYV
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttggtggagctccccgattccttgcctctcctcgtactttctcagtccaa
agtggcacgaatgccatcctgaagtggcaggtggccggggagccgcgtcccagcattgtc
tgggagaaagatggctctgtgctagagctgccctctggccggatgtttcttgaagtgaac
ggggatgcatacagcctgctggtctctcaggctggcccaggggacagcggacgctatgtg
tgcaaagcaaagaacagtgtaggtgaaacctatgcagctgctctgctgaaagtggaaaca
gggtccgaactgaaacctaatggagatcttgactgtcagcctcccaccttcttgaatagg
cctgtctcagcatgcgtgacccggggtgaagatgtgacttttgcctgtagagtctcaggg
cagcttgaatggaaaaaagatggacgcagattatcagacatctttgagagcagccattac
agaatggatgtagagcctggggattggcattctctgcacatctataacacccgattgcca
gatgcaggcgtctatgtgtgccgagcacagaacagctttggggagagcatggctgcagcg
gtgctcctggtagaccctgtggcatgccttcctcataatgacccatctcaaggggctctg
caaaacagccatttcaagaagccacctgagtcacaagaggataagaggcatccacaccac
cctgcacgcattgtattgtctgaaggcaggcagaatggagaagtgcttcccagctccccc
cctacaaagtcttttactgtgaatgaagggaagcatgccaagttccgctgctacgtcatt
ggcaagcccaagccggagatcgtctggcagaaggatgggaaggtgttgtcccctggacga
agacacctgctctacgaggatagagagggctacttcatccttaaggtgttgtactgcaca
gcacgagattgtggactctatgtgtgcacagcctgcaacactgccggccagacgctcagt
gcggtgagactccatgtccaagaaccccagctacagttccaggcacctttgatggatgta
gaagtgatggaacaccaagatgcagtcttagagtgccaggtgcctctagagacaatgcct
accacatggtatcttgaagacaagcgcctgcaacccagccccaagtacctgatggaggag
cagggcctactgaggcggctgacagtgcgtgatgcacgggccgatgatgacggcatctac
ctgtgtgagatggaaggcaagggccgcagcattggggagctctctgtgcaaggtctcatt
gtaaagcgcttgccacgaaaactggatgtgatggaaggagaaaatgcagccttctatgtg
gagacccgggaacctgtggaagcaccaagttggggccgtaatgggcaagaactggttgag
gccccacatacgcttattaggagctttgggaaaacacatattttggtattggtacatgtg
tcacggcatgatgctggagtcatcactttcatggcgggcgactcacaaacatcagcacag
cttcgtgtgaaatgtgccaaaaggattccaccaagtgcacctgtggaagtaaagatgtgc
accagacatagcaatgctgccctcctggcgtggtgcccaccaccaaatctacatcgtagc
ccaccaagcagctacatccttgagaggcagactgtaggagaggctgagtgggtgccttgc
ctaaccactgatgtcgctagcatggttgaagttccaggggatggtgtgccccaggaggct
gactaccgcttccgtgtatgctctgccaatcagtatgggtgcagtgagcatgtggaattc
ccaggctccgtgcatcttgtgcccagagcccatataaaggagggactgcaagatgtgacg
gtttgtatcaatgaggatgccactttttcagtgaagctgtcagctcccatgtctggttgc
tggtacctcagtgggaagaggctggcaaaggaagaggaagaccagcagtacctcatcatg
cacagtggagtgagccatactttgcaggtcaaaaatgtgcagttagctgccaatgggtcc
gaggtgcgatttgaagccaatggtgtgaaagaatcagcagtgttgcatgtacaagaaact
cctgtccatattatgcactgcagccctgaggaagctcacacctacctggtctcagagcgt
gtggtactggcctgtgagctgtcccgtcctaacgcccctgtgtgctggtacaaggatggg
gaaaaggtggaggaaagccaggacctcctgctggagaacgagggtccacactgccggctg
atccttgtctctgcccacatccaggatacaggagagtttgtgtgtgatgcaggtggtgac
tctgccttcttcaacatcactatcacagagccacctgtacaggtggtgtgctccaatgca
gatgaggctcatacctactgggctttagaacaagtaactttggcctgtgagctgtcccgc
cctaatgctctcgtgcactggtataaggatgggaaagcagtagaagaaacggagggtctg
cggctggaaagcgaagggcctcatcaccgcctgatcattgcctcagcccaggtgcaagac
acaggagaatttgtatgtgatctgggaggcgattctgtctttttcactgtaactgtttca
gaccatcctgtaaggatcatatactccaatgatgaagagagccatgtctaccaggttgca
gaacgcatagagctatcctgcgagctttctcgtcctgatgccctcgtacattggtacaag
gatggagaagaggtggaagaaagtgaaggactcctactggagagtgagggccctcaccgt
cggctggtcattccttcagctcaagtaaaagattctggggagtttgtgtgtgatgcaggt
ggcgattcggcattcttcaacatcactgtcaaagaaccacttgtgcaaattgtgcagtcc
aatgcagaggccactcatgcttatcagacctccgaccgcgtggtgctgacctgcgagctt
tcttgccccaacgcccctgtccaatggtacaaagatggggaggaattagaagaaggtgat
ggcttgctatttgagagccaagggccccaccgacgactcgtccttcccttcgcgcaagtg
caagacactggcgagtttgtgtgtgatgcaggcgatgactctgccttcttcaatgttaca
gttgcagagcctctggtgcagattttgcagccagtggaacgttcactagagaagcaggtg
caggaatttgaccgcctagagttgagctgcacagtgtccattcctgatgccccggtgcgc
tggttcaaagatggcctagaggtggatgagacacacaacctgttgcttcacgcagaaggt
gcagaacgttgcctgatgatcttgcggacaagcgttgaagatgctggggaatacatctgt
gagaccaaggatgaatctgtctcctttgatgtcatggtttcagagtcccctgtgaagatc
gtgcagccgcgcaggactccctctgtcctgaaggcctcaacgggggatacagtggccctg
gcctgtgtgctctcccatgggaatgcgcctgtccactgggttaaggatggtgtcagagta
gaggccaacagcggcctcatcctggaggaagagggtgcccggcggtgtttggtcatccct
gcagctggcccagagcattctgggaaatatatctgccacactcttgatgataccatgacc
ttcaccctccaggtgtctgatcccccagtccaaatagtggggcgagatgagctgcaaaca
caccaccattgcttggtttctgaagacctggtgctctcgataacattgtcttgccccaaa
ggagaggtgaagtggtacaaggatggggaaaaactgcaggacacggaacgtatgtggttg
gaacaagatggaacacgacattcattggtgatttcagcagtggaaatgtctgatgctggg
gaatatctgtgcgacagtggtgatgatagccttatcttctatgtcatgatagaagtccct
aggttggtggagataatttctgagctgcataatttaacggtgctggaaggggatgatgcc
attttcaaagtggtgatatgtcccgatgatgtcaggttgaattggcagctgaatggacaa
gacgtcgtgaacagtgagcggttgaccataaccaagaatgggctatgccacaccctcacc
ctacgacaatgccgcttgagtgacaccggcatagtcaccgtctgtgcggaaggtctgtca
agttcaggcagactcagtgtgcaagaggctcaggtgctgtttgtccggacgttgcgtgat
ttggcggctgaggaggggcaggatgtccgcttggaagtggagctgagcgtggagagtgcg
gaggtgcagtggatgaagcaaggcatcttactgcagcagaatccaagactctccatggag
gtgcaagggccaaaaagggtccttaccatccatcagattgagcttgctgaccgaggcacc
tatcgctgtgagagtctgcatgatcgcactcaagccaggctgagtgtggaaccccggaag
gtgacagtgaagaaaccactatcagatgtggagacattggaaaaggagacagtgacattt
gagcttgagctttctcaccccaatgtattgggggtctggacgcgtgacggcatccgtgtg
aagcctagttccacctgccaaatgagtgccactggttgtgtgcacagcctgacgctgcaa
aggctcatgctagatgacacagggactgtggccttcactgcggatactgtgcggagctgt
gcgcgccttacggtccgagagccaccaattacaatgctgcgcttgccccaggacttggga
attcccgagacaggctcagctacctttgagtgtgagctgtcccgacccctggctgaggtg
aagtggtacaaggatggcaaggagatccaggtgagccccaactgccgcatatattcagtg
gggcgtcggcgtctcctgcagctcaaccattgcagccttgaagatgctggcgaatatatg
tgtgatgctggtgattgccatgcctctgccaaactgagaatctttgaacgtcaggtccag
attgtgcgagagctggaggatgtccgtgtgcaggagaacgagaatgctgttttcatatgt
gaggtgtccctagcggaggtgaaaggtgaatggtataataatggagagagactcaaagtc
accagcactgtgaaaatacgacaggaaggaacccgccacttcttgcttctgagctctgcc
cgccctgaggacacaggccaggtccgttttgtggccaagacagcagcttcggaagccagg
ctggaagtggaagcattgccaattcgcattgtgaagccactgcgtgataaaactgtactg
gtgcgtcacaaagccacgctggaatgcacagtgtctcaggctcgaggacgtgtgcgctgg
tttcggggtgacacagagatctatgctgggccaaagtatgaaatctgcaacttggattgt
tatcgaactctggttattcactgtgtggagcctgcagatgaaggcctgtatacctgtgat
gccctggatgatcattccacagcccgcctgctagtggaggctgagggaatccaggtggtc
caacctctgaagaacgtggaagtgatggctccctttgaggcgcagtttgagtgtgaaata
tctgccccttcagacttcactccccagtggagcctcaatggggaggagctgcagcctggc
ttgcaggtgcagatggagagtgtgggacacatccataaactgaggttctgcaggactagc
cctaacatgagtgggatggtgaagattaccattggtaatgcccgttccaaagcccatctc
acagtgcgaggtaaatatgtctga
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