Thamnophis sirtalis (common garter snake): 106545955
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Entry
106545955 CDS
T06107
Symbol
LRR1
Name
(RefSeq) leucine-rich repeat protein 1
KO
K10348
LRR-repeat protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106545955 (LRR1)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
106545955 (LRR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
HTH_57
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
106545955
NCBI-ProteinID:
XP_013918161
UniProt:
A0A6I9XWK3
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MRLPCDVVVVSRLLPSAGIRAPGRAARALLALGKPTGGDGDICLLVSTARHRPGAKYQLK
ENIDQLFTKFVDEGKATVRLKEPAVDICLSKANVSELRTFLYAVKLAHRGIKEETLPLSK
LVSPKASEVEKPKTKMSITSKKDYPLTRNFPYSLEYLQASYCKLARIDMRMLCLRSLRKL
DLSHNSIKQLPATIGDLVCLQELNLQDNHLESFNVALCNSTLKKSLQSLDLSQNKIKALP
AQFCYLQKLIQLKLDDNNLIRLPFKIGQLSHLRFLSVARNKLPFLPSEFAKLSLESLDLF
GNPFEQPKPLVPDIHLKIPLTLLEYSARATINYRIPYDCHILPYHLCDDLHMSKTCQCGR
ACVTCFIQTTVTMNLHSVAHTVVLVDNMGGTEAPILCYFCSLTCYSQFLDKHLQSVR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccgtgcgacgtggtggtggtgagtcgcctgctgccctcagcggggatacgc
gccccgggacgcgctgccagggctctgctcgccctggggaagccaaccggaggagacgga
gacatctgccttctggtcagcactgcccgccaccgccctggagccaaataccagttgaaa
gaaaacatagatcagctttttaccaagttcgtggatgaaggaaaagccaccgtacggcta
aaagaaccagctgtggatatttgtcttagcaaggcaaatgtcagtgagctgaggactttc
ctttatgcagtgaaattggctcatcgaggcatcaaagaggaaactttaccactttctaag
ctggtgtcaccaaaggcctctgaagttgaaaaaccaaaaaccaagatgagcataacatca
aagaaggattatcctttaactcgaaatttcccatactctctggagtatctccaagcgtcc
tattgcaaattagctcgtatagatatgcgtatgctttgcctgagaagccttcggaaactg
gacttgagccacaatagtattaaacagctgccagcaactattggggaccttgtttgcctc
caggagctcaacctacaggacaatcacttggagtcattcaatgtggctctatgcaactcc
actctcaaaaaatcacttcagtctctagatctcagccagaataaaatcaaagcgctgcct
gcacagttttgctacttgcagaaactcatacaattgaagttagatgataataatttgatt
agattgccattcaagattggtcaactgtcgcatctccgcttcttatctgtggctcgtaat
aaactcccatttttgcccagtgagtttgctaaactctcacttgagagcctggatttattt
ggcaatccttttgagcagccgaagccacttgttcctgatatccacttaaaaataccattg
actttactagaatattctgcaagggcaaccatcaattacaggatcccatatgattgccac
attcttccttatcacctttgtgatgatcttcacatgtcaaaaacttgtcaatgtggacgg
gcttgtgtgacctgcttcattcaaacaacagtgactatgaatctgcacagtgtggcccac
acagttgttcttgtggataatatgggaggcacagaggcccctattctttgctatttctgc
tctctcacatgctattctcagtttcttgataaacatttgcaaagtgtgaggtga
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