Thamnophis sirtalis (common garter snake): 106545978
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Entry
106545978 CDS
T06107
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04270
Vascular smooth muscle contraction
tsr04625
C-type lectin receptor signaling pathway
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106545978 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
106545978 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
106545978 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106545978 (ARHGEF12)
Membrane trafficking [BR:
tsr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106545978 (ARHGEF12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
106545978
NCBI-ProteinID:
XP_013918184
UniProt:
A0A6I9XQ71
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MSGTQSAITDRFPLKKPTRHGSILSRESPADKKQKVEHCISAHDFDPTGLVQRCVIIQRD
ENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGS
YVALTVQGRPPGSPQIPLADSEVDSAAAFGHMSPIMTSPHSPGSHGNTERITSPVLMGEE
NNIVHNQKVEILRKMLQKEEERLEFLQEDYNRTPAPRLLKDIQEVKKHIPQLQEQLSKAT
GSAQDVILSSKSISESLQITEVEAERGDGPNRGDCHFGDGPQVNDTAESPRSVLREQSYL
DDSPEKTETHETDSPSSLGSPSSRVAPPIIGAEDDDFDGEQEQINGQCSCFQNIELLKSR
PAHLAVFLHHVISQFDPASLLCYLFADLYKQTNSKETRRVFAEFNQFFLDRAANLKVPVP
DEIASDLEKRRLELIPEELHRHCIQTMQEKVFLEVQKHLEDFRQKRSMGLTLAEGELTRL
DAERVRDRVTLEKERACAEQILTKIEDVLMSSQPVEEDKSSAIQYVVLTYMKHLGVRVKE
PRNLDQKRGRIGFLPKIKQSMKKDKEGDEKKRRVFSNILGPPRRPSRHDSYAIGRAMEMQ
KQRHPKHLTSSSSVSPEPPDLVKMRQSGISDGMDSAFQPANFVSPAASGTFPSQEGSKDG
ETGPKQVGEAINSGDSVDGTPCTSGIIFDFPSPPLDHLQEEEGEVDRLGESGTPKPFRKV
DSVNAGDVQSEDELFDFDMETDQPNWQQLVSREVLLGLKPSEIKRQEVINELFYTERAHV
RKLKVLDHLFYQRVYREGILTAPDLRKIFSNLEDILQLHTGLNEQMKAVRKRNETSVIDQ
IGEDLLTWFSGEGEEKLKQATATFCSNQPFALEVIKSRQKKDSRFQTFVQEAESNPLCRR
LQLKDIIPTEMQRLTKYPLLLDNIAKYSEQPLEKEKVKKAADHCRQILNFVNQAVKEAEN
KQHLEDYQRRLDLSYLKQVEGPLLDEFRNLDLTKKKMIHEGPLTWKVNRDKTIDLYTLLL
EDILVLLQKQDDRLVLRCHSKILANTADSKHTFSPVIKLNTVLVRQVATG
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccgcaatcacggacaggtttcccctcaaaaaacctacaaggcat
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggtcgagcactgcatt
agtgcccatgattttgacccaacaggtctagttcaacgatgtgttatcattcagcgggat
gaaaatggttttgggttaacagtcagtggtgacaatccagtctttgtacaatccgtcaag
gaagatggagcagccatgcgggctggggttcaaactggtgaccgaatcattaaggtgaat
ggaactctggtaacacattccaaccatttggaggtggttaagctgataaagtcgggttcc
tatgtagcgctcactgtgcaggggcgcccacctgggtcgccccagattccactggctgat
tctgaggtggactcagcagctgcctttgggcatatgtctcccatcatgacatcacctcac
tcccctggatcccatgggaacaccgagagaattaccagtccggtgctgatgggggaggaa
aataacattgttcacaaccagaaagtagagattttgaggaagatgctacagaaagaagag
gaacgactggagttcctgcaggaagactacaaccgcactccggctccccggctgctcaaa
gacatccaggaagtcaagaagcacattcctcaactgcaggagcagctgtccaaagcaaca
ggctcggctcaggatgtcattttgtcttccaaatctatatccgaatctttgcagatcact
gaggtggaagctgagaggggggatgggccaaacagaggagactgtcattttggtgatggc
ccccaggtgaacgacacagcagagagtcctcgcagtgtcttgagagagcagagctatctg
gatgacagcccagagaagactgagactcacgaaacagattctccatccagtcttggaagc
ccttcctctcgtgtggcacctccaatcataggagcagaagatgatgactttgatggtgaa
caagaacagatcaacgggcagtgtagctgtttccagaatatagagctactgaaatcacgt
cccgctcacttagctgtctttttgcatcatgtcatctcccagtttgaccctgcttctttg
ctctgttacctgtttgcggacctgtacaaacaaacaaattccaaagagactcgccgagtg
tttgctgaatttaatcaattttttctggatcgagctgcaaacctgaaagtcccagttcca
gatgaaattgcaagtgatttagaaaagagaaggctggaattaattcctgaagaattgcac
cgccactgtattcaaactatgcaagaaaaagtgtttcttgaagtacaaaagcaccttgaa
gattttagacagaaacgcagcatgggcctcacgctggcagaaggagaactgaccaggctg
gatgcagaacgtgtccgggaccgggtaaccttagagaaggagagagcgtgtgcagagcag
atcctgactaaaattgaagacgtgctgatgtcatctcagcctgtagaagaggataagagt
tcagctatacaatatgttgttcttacctacatgaagcaccttggtgtacgtgttaaagag
ccccggaacctagaccaaaaacggggacggattggattcctgccaaagataaaacaaagt
atgaagaaagataaggaaggggatgaaaagaagaggagggtcttctcaaatatcctggga
cctccaaggaggccaagccgccatgacagctatgcaataggcagagccatggagatgcaa
aaacaacgccatccaaagcacttaacctcatcgtcttcggtcagcccagaaccgccagat
ttggtcaagatgcgccaaagtgggatcagtgatggcatggattcagccttccagcctgct
aactttgtgtctccagcggcttccggaacattcccatctcaggaagggagcaaagatggc
gaaacagggccaaaacaagttggagaagcaattaattctggtgattctgtggacggcaca
ccttgtacatctggcatcatatttgatttcccgtctcctcccctggaccatttgcaagaa
gaagaaggagaagttgataggttaggagaatcagggactccaaaacctttccgcaaggtg
gacagtgtgaatgctggggatgtccagagtgaagatgagctcttcgatttcgacatggag
actgaccagcccaactggcagcagctggtgagccgtgaagtgttgcttggcttgaaaccc
tctgaaattaaacgccaggaagtgattaatgagttattctacactgaacgtgctcatgtc
cgtaagctgaaagtcctggatcacttgttctatcagcgtgtgtaccgcgaagggatcctg
acagcgcctgacctgcggaaaatattttcgaacctggaggatatcctccagcttcacact
ggactgaatgagcagatgaaagcagtgaggaaaagaaacgagacatctgtaattgatcaa
attggagaagatttgttaacttggttcagtggagaaggcgaggagaagttgaagcaagcc
acagctaccttctgtagcaaccaaccttttgctcttgaagtgatcaagtcacggcaaaag
aaggactctcgctttcagacttttgtccaggaagctgagagcaatccactgtgtcgccga
ttacagctaaaagatattattcccactgagatgcaacggctcaccaagtatcccctcttg
ctggataatattgcaaagtactcagagcaacctttagagaaggaaaaagtgaagaaagca
gcagatcattgtcggcagattctcaattttgtgaaccaagctgtcaaagaagccgagaac
aagcagcatttggaggactaccagcggcggcttgatttgtcctacctgaagcaagtggag
ggccctttgctggatgaattcaggaatttagatctaacaaagaagaaaatgattcacgaa
gggcctctgacttggaaggtgaatcgtgacaaaactattgatctctatacattgctcttg
gaagatattctggtattgttgcagaagcaagatgacagactggtgttgaggtgtcacagc
aagatcctggctaatacagccgatagcaagcacacatttagccctgttattaaattgaac
accgtcttggttcgccaagtggctacaggttag
DBGET
integrated database retrieval system
