Thamnophis sirtalis (common garter snake): 106545988
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Entry
106545988 CDS
T06107
Symbol
UBTF
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106545988 (UBTF)
03021 Transcription machinery [BR:
tsr03021
]
106545988 (UBTF)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
106545988 (UBTF)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
106545988 (UBTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
106545988
NCBI-ProteinID:
XP_013918196
UniProt:
A0A6I9XWP1
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MNGEADSPTNLEMTAPKNQDRWTQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWDKVAF
KDFSGDMCKIKWIEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQDFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKIYLKVRPDATTKEVKEALGKQWSQLSDK
KRLKWIHKALEQRKEYEEMMRDYIQKHPEMNIEEGAPQRSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQRKKDYEIELLR
FLESLPEEEQQRVLGEEKMLGINKKGATSPASKKSSPDASKGGSEKPKRPVSAMFIFSEE
KRKQLQEERPELSESELARLLARMWNDLSEKKKAKYKAREAALKAQTEKKHGSDKEDRGK
LPESPKTSEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPCSTNASKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
GSRWQRISQSQKDQYKKLAEEQQKQYKVHLDMWLKTLSPQERAAYKEHTSSKRKNMGKMR
GPNPKIKPSMPSKSESEEEDEDDDEEEEEEEEEDDDDENGDSSEEGGDSSDSSSDEESED
GEENEEEDDEEDDDDDEDNESEGSSSSSSSSGDSSDSDSN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaagcagatagtccaaccaatttagaaatgacggccccgaaaaatcaagac
cgttggacccaggaagacatgttgaccctcttggagtgcatgaaaaataatctgccctcc
aatgacggcagcaaattcaaaaccacagaatcccatttggattgggataaagtggccttc
aaggacttctctggtgatatgtgcaagattaaatggattgagatctccaatgaggtgaga
aagttccggaccttgacagaattgataatggatgctgaagaacatgtgaaaaacccttac
aaaggcaaaaaactgaagaagcatcctgactttcccaaaaaacctttgactccgtatttc
cgtttcttcatggaaaagcgagcaaaatatgctaagctacatccagagatgagcaacttg
gatctaaccaaaattctctcaaaaaaatataaggaactccccgaaaagaaaaagatgaag
tatattcaggatttccaacgagagaaacaagattttgagcggaatctggcaagatttagg
gaagaccatcctgacctcattcagaatgccaagaaatccgatatcccagaaaagcccaag
accccccaacagctctggtatactcatgagaagaagatctacttgaaagtccgacctgat
gccaccacgaaggaggtgaaggaagcgttgggcaagcaatggtctcagctctcggacaaa
aaaaggctgaaatggattcataaggctctggagcagcggaaggagtatgaggaaatgatg
cgggattacatacagaagcatccagagatgaacattgaggagggggcaccacaacggtcc
acactaacaaaagcagagaggcaattgaaggacaagtttgatgggcgacccaccaagccc
cctccaaatagttattcgctgtattgtgctgagctgatggcaaacatgaaagatgtccca
agcacagaacggatggtactctgcagtcagcagtggaaacttctctcccaaaaggaaaag
gatgcctaccacaaaaagtgtgatcagagaaaaaaagattatgaaattgagcttttgcgt
ttcctggagagcctgcctgaagaagaacaacagagggttttgggagaggaaaaaatgctg
ggaataaataagaaaggtgccaccagccctgcctctaagaagtcatcaccagacgccagc
aagggaggttctgagaaacccaaacggcccgtttctgctatgtttatcttctcggaggag
aaacgcaagcagctgcaggaggagcgacccgaactgtcggagagtgaactggcccggttg
ctggcgcggatgtggaatgatctttcagagaaaaaaaaggccaaatataaagctcgggag
gctgccctaaaagctcagacagagaaaaaacatggttctgacaaggaagatcgtggtaaa
cttcctgagtcacccaagacttctgaggagatctggcaacaaagcgttataggagattat
cttgcccgctttaagaatgacaggggaaaagcactaaaagccatggaggctacctggaat
aatatggagaaaaaagaaaaacttatgtggattaagaaagcagcggaagatcaaaaacga
tatgagcgagaactgagtgagatgagggcaccaccatgttcaacaaatgcctccaagaag
atgaaattccagggtgaaccaaagaaaccccccatgaatggatatcagaaattttctcag
gagctactttcaaacggtgaactcaatcatcttcctctaaaagagcgaatggtagagatt
gggagccgctggcagcggatctctcagagccaaaaggatcagtacaaaaagttggctgaa
gaacagcaaaaacaatacaaagtgcacctggacatgtggctgaagaccttgtcaccgcaa
gagagagctgcctacaaagagcatacctccagtaaacgtaagaatatggggaagatgcgt
ggcccaaatccaaaaataaaaccttcaatgccgtccaaatcagaatctgaggaagaggat
gaagacgacgatgaggaagaggaggaggaagaggaagaggatgatgatgatgagaacggt
gattcttctgaggagggaggagactcttcagattcaagtagtgatgaggagagtgaagat
ggggaagagaatgaagaagaggatgatgaagaggatgacgatgacgatgaggacaatgaa
tcagaaggcagcagcagttcctcatcctcttcaggagactcttctgattcggactctaac
tga
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