Thamnophis sirtalis (common garter snake): 106546005
Help
Entry
106546005 CDS
T06107
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106546005 (PCDH17)
Cell adhesion molecules [BR:
tsr04515
]
Cadherins
Protocadherins
106546005 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
NUC153
DUF7499
Motif
Other DBs
NCBI-GeneID:
106546005
NCBI-ProteinID:
XP_013918237
UniProt:
A0A6I9XVU2
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSLSAWCFILCWAPALALRNLNYSVPEEQGAGTVIGNIGRDARLQSGSSSGGSPSLERPR
GAKATFRVLENSAPHLLDVDGESGLLYTKQRLDREALCRRNAKCQLSLEVFANDQEICMI
KVEIQDLNDNAPAFPSDQVDLDISENAAPGTRFPLASAHDPDAGENGLRTYLLTRDDYGL
FALDVKARGDGTKFPELVVQKPLDREEQSHHTLVLTALDGGEPPRSGTVQLNVRLIDSND
NSPVFEAASYVVELPENVPLGTVLLDLNATDADEGTNGQVLYSFSGYTPDRVRELFSIDP
QTGLIRVKGNLDYEEGNLVEIDVQARDLGPNPIPAHCKVTVHLLDRNDNAPTIGFVSVRQ
GALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVQGSDGSGGDGAVPFTLEENYDNLYTVV
TDRPLDREVQDEYNVTILARDGGNPPLNSTKSFSVRILDENDNPPRFSKSLYVLQVPENN
IPGEYLGSVLAKDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFNYEQT
KHFEFHVLAKDSGSPHRESNATVRVTVLDVNDNAPMIVLPALINDTAELQVPRNAGVGYP
VGTVRAMDNDFGESGRLTYEIVEGNEEHLFEIDPTSGEIRTLHPYWEELSPVAELVVKVS
DHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSIILLAA
MITIAVKCKRENKDIRTYNCRIAEYSHPQLGGGGGGGLETLHQEN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctccgcttggtgcttcatcctttgctgggctcccgccctggccttaaggaac
ctcaactattcggtgccagaggagcaaggcgccggcacggtgatcggcaacatcggccgc
gatgcccggctgcagtccgggtcgtcgagcggcgggtcgccctcgctggagcggccccgc
ggtgccaaggcgactttccgcgtgctggagaactcggctccccacctgctggatgtggac
ggcgagagcggcttgctgtacaccaagcagcgcctggaccgcgaggctctctgccgccgg
aacgccaagtgccagctctccctcgaggtcttcgccaacgaccaggagatctgcatgatc
aaagtggagatccaggacctcaacgacaacgcgcccgctttcccctccgaccaagtggac
ttggacatctccgagaacgcagcgccgggcacccgcttcccgctggccagcgcccacgac
cccgacgcgggcgagaacggcctgcggacttacctgctcacccgcgacgactacggcctc
ttcgcccttgatgtcaaagcgcggggcgacggcaccaaattccccgagctggtggtccag
aagccgctggatcgtgaggagcagagccaccacaccttggtgctgaccgccctggacggc
ggggagccgcctcgctccggcaccgtccagctaaacgtccgcttgatcgactccaacgac
aacagcccggtcttcgaggcggcttcctacgtggtggagctgccggagaacgtcccgctg
ggcaccgtcctcctcgacctcaacgccaccgacgccgacgaaggcaccaacggccaggtg
ctctactccttcagcggttacacgcccgaccgggtgcgggagctgttcagcatcgatccc
cagacgggcttgatccgggtcaaaggcaacctggactacgaggagggcaacttggtggag
atcgacgtccaggcccgggatttgggtcccaatcctatccctgcccattgcaaagtgact
gtgcatttgttggatcgtaatgacaatgcgcccaccattggcttcgtctcggtgcgccag
ggggccctgagcgaggcggccccgccgggcaccgtcatcgccctggtcagggtgacggac
cgggactccgggaagaatgggcagctgcagtgccgggtgcaaggcagcgatggcagtgga
ggagatggggccgtgcccttcaccttagaggagaattatgataacctgtacacagtggtg
accgaccggcccttggacagggaggtgcaggacgagtacaatgtcaccatcttggctcgg
gacgggggcaacccgcctctgaattccaccaagtccttctcagtcaggatcctagacgag
aatgacaacccgccacgtttcagcaagagcctttatgtgctgcaagtgcctgagaacaac
atcccgggagagtatctggggtccgtgttggccaaggaccccgacctgggccaaaatggc
accgtctcctactccattctgccgggacacgtgggggacgtctctatttacacctacgtc
tcggtcaacccaaccaacggggccatctacgctttgcgcagcttcaattacgagcagacc
aaacattttgagttccacgtgttggccaaagactcgggctccccccaccgggagagcaac
gccaccgtccgggtcaccgtcttggatgtcaatgacaacgcccccatgattgtcttgccg
gccctgatcaatgacacggctgaactccaggtcccccgcaatgccggcgtgggctacccc
gtgggcaccgtccgggccatggataacgatttcggggaaagcggacgcttgacctatgag
attgtggaaggcaacgaggagcatctctttgagatagaccctaccagtggggagatccgc
acccttcacccttactgggaagagctgagtcctgtggcagaactcgtggtgaaggtcagt
gaccacgggaagcccagcctttctgcagtggccaagctgattgtccgggccttggctggg
cctttgcctgaagcaggagagccccaggtcaacggggaacagcaccgccggcctcactgg
gacctctcgctgcccttaatcgtgaccctgagcaccgtgtccatcatcctcctggctgcc
atgatcaccatcgccgtcaagtgtaaacgcgagaacaaggacatccgtacctacaactgc
cgtattgctgagtacagccaccctcagttgggtggagggggcgggggaggncttgaaact
ctacatcaagaaaactaa
DBGET
integrated database retrieval system
