Thamnophis sirtalis (common garter snake): 106546058
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Entry
106546058 CDS
T06107
Symbol
LRRC8B
Name
(RefSeq) volume-regulated anion channel subunit LRRC8B
KO
K22038
volume-regulated anion channel
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106546058 (LRRC8B)
Ion channels [BR:
tsr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
106546058 (LRRC8B)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_LRWD1
PDC10_C
EF-hand_12
Motif
Other DBs
NCBI-GeneID:
106546058
NCBI-ProteinID:
XP_013918296
UniProt:
A0A6I9XQH2
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MITLTELRCLADAQASFHILKPWWDVFCYYLTMIMLLVAVLAGALQLTQTRLLCCLPCKL
EFDNHCTVPWHLIKSNINESFNSATPEIHPLQIQNYLHRQQYSYIDAVCYERELHWFAKF
FPYLVLLHTFIFAACSNFWLYYPSTSSRLEHFVAILHKCFDSPWTTRALSETVAEQSVRT
VPFSKSKTFLPSPSNMTELESKRQSMSYSQTGLETAGRESTSNVLDRREGEQAKSIFEKV
KRFRVHVEQKDVIYRVYLKQIVIKVIVFILIMIYVPYYLTFINLEIDCIVDIRTFTGYKR
YQCVYSLAEIFKVLASFYVVLVILYGLTCTYSLLWMLRSSLKQYSFEKLREQSNYSDIPD
VKNDFAFILHLADQYDPLYSKRFSIFLSEVSENKLKQISLNNEWSLERLKSKLVRNPQEK
MELHLFMLSGLPDDVFELTEIEVLTLELIPEVKLPPSLSQLSSLKELNIYHSTLTVEYPA
LHFLEDNLKILRLKSVDMGKIPRWVFYLKNLQELYLTGCYVPEPQNGFYSEGFQDLVNLK
AIHLKNSLSRIPQVVTDQLPSLQKLSIDNEGKKLLVLTNLKKLLNLRILELISCDLERIP
HSIFSLNYLREIDLKENNLRTVEEIISFQHLENLSCLKLWHNKISYIPVQIGTLANLEQL
YLNHNNIKKIPPQLFLCKKLHYLDLSYNKLTSIPDEIQYLTNLQYFAVTKNHIEALPDEL
FQCKKLQHLLLGHNSLMYLSPQVGELSNLVHLELKGNYLELLPAELEECNSLKRSCLIVE
ECLLKTLPLRVTEHIQICLDKV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattacattaactgaactcagatgcttagcagatgcccaagcatcatttcacatcttg
aaaccgtggtgggatgttttctgctactatcttaccatgataatgctgcttgttgctgtc
cttgctggagctcttcagctcactcagactagattgttatgttgtcttccttgcaagctt
gaatttgacaatcattgcacagtgccttggcatctgattaaaagcaacatcaatgagtcc
ttcaactctgcaacaccagaaattcatcctcttcaaatccagaattaccttcataggcag
cagtattcttacattgatgccgtgtgttacgagagagaacttcattggtttgccaaattt
ttcccgtacttagtgcttctccacactttcatttttgcagcttgcagtaatttctggctt
tactaccccagcacaagttcaaggctagagcattttgtagccatacttcacaaatgtttc
gattccccttggaccacacgtgccctatcagaaacagttgctgagcaatctgtgaggact
gtgccattctccaaatcgaaaacatttcttccctcccccagcaacatgacagagctggag
agcaagaggcaatcaatgtcctactcacagactggactagaaacagctggaagagagagc
acttcaaatgttcttgaccgaagagaaggggaacaagcaaagtcaatatttgagaaagtg
aagcgattcagggtacatgtggagcagaaagatgtcatttatagagtgtatctaaaacag
attgtgatcaaggtcattgtgttcattttaataatgatttatgttccgtattatttaacc
tttattaacctagaaatcgattgtatagttgatattcgaacctttactggctacaagcga
taccaatgcgtttattcactggctgaaatttttaaagtgcttgcttcgttttatgttgtc
ctggtgattttatatggcctgacatgcacttacagtttgctatggatgctgagaagttca
cttaaacaatattctttcgagaagctgagggagcagagtaactacagcgatatccctgat
gtaaaaaatgattttgcctttattcttcacctcgcagaccagtacgaccctctatattca
aagcggttctcgatatttctctccgaggtgagtgaaaacaagctgaagcaaatcagtctc
aataatgaatggtctttagagaggctgaagagcaagctggtgcgaaaccctcaagagaaa
atggagcttcatctttttatgctcagcggcctgcctgatgacgtctttgaactcacagag
atagaagttctaacactagagctcattcctgaggttaaacttccaccctctctaagtcag
ctctccagtcttaaagaactaaacatttatcattcaacattaactgtagaatatccggca
ctgcacttcctcgaagataatttaaaaattctgcgcctaaaatctgttgacatgggaaag
attccacgctgggtattctatctaaagaacttacaggaactgtacttgactggatgttac
gtgcccgaaccccagaatggcttctacagtgagggtttccaagaccttgtgaatctgaaa
gcaattcatttaaagaatagcctttcccgcatacctcaggtggttacagaccaattgcct
tcactgcagaaattgtctattgacaacgaggggaaaaaactgttagtgttgaccaacttg
aagaaactgttaaacctgagaatcttggaactgatcagctgtgatttggagcgtatccct
cattctattttcagcctaaactatctgcgtgaaatagatttgaaagaaaataacctacga
acggtagaagaaattattagctttcagcaccttgaaaatctttcttgcctgaagttgtgg
cacaacaaaatatcttacatccctgtgcagattggtaccttagcaaacttggaacagctc
tacttaaatcacaacaacattaaaaaaatcccaccacaactttttctttgcaaaaagcta
cattatctggatctgagttacaataagctaacctctattcctgatgaaatccaatattta
acaaatttgcagtactttgctgttacaaagaatcatattgaagcacttcctgatgaatta
ttccagtgcaaaaagctacagcaccttcttttgggacataatagcctaatgtacttgtcc
cctcaagttggtgagctttccaaccttgttcatctggagctcaaaggaaactatctcgag
ttacttcctgctgagctagaggaatgtaattctctgaaacggagttgtctaattgtagaa
gaatgcttgttgaaaacacttccccttcgagtaacagagcatatacagatatgcttggac
aaagtttga
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