Thamnophis sirtalis (common garter snake): 106546170
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Entry
106546170 CDS
T06107
Name
(RefSeq) excitatory amino acid transporter 1-like
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
106546170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106546170
Transporters [BR:
tsr02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
106546170
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
106546170
NCBI-ProteinID:
XP_013918432
UniProt:
A0A6I9XWA4
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Position
Unknown
AA seq
592 aa
AA seq
DB search
MLSPIMGEHQTHINSLFLNEETSKPLESGSRVHRFRHALEKRAAHARKQMYNITRESVKG
FFQRNAFVLLTILAVLLGITLALALRPYRMTYRQIKYFSFPGELLMRMLQMLVLPLIVSS
LITGMASLDSSASGKMGLRAVVYYMMTTIIAVFIGIFMVLVIHPGKGSKKGLQGENKYDQ
VHATDAFMDLIRNMFPPNLVEACFRQYKTQYSVRVINRTVVSNTSSAAMLPQHPNQDTNS
SGFNYNATMATLPLLPLENALGVWNNVTKALGSFPEVLNFEEVIPGPGSVNGVNALGLVV
FSICFGLVIGNMKQKGHPLREFFDCLNEAILRMVAVIIWYAPIGILFLIAGKILEMEDLA
VMGGQLGLYTLTVIVGLLIHGLCVLPLIYFIVTRKNPWIFMAGLLQALVTALGTSSSSAT
LPVTFRCLEENNRVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNYQLDFGQIIT
ISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLLMTVDWFLDRLRTTVNVLGDS
LGAGVVEHLSRHELEMQDAELSNSVLEENEKPYHLIYQENDTHKHLNSETPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtccgattatgggcgagcatcagacccacatcaacagcctcttcctgaatgag
gagacatctaagccacttgaatcggggagccgggtgcatcgcttccgccatgccctggag
aagcgggcagcacatgccaggaagcaaatgtacaacatcacccgagagagcgtcaagggc
ttcttccagagaaatgcttttgtgctactcaccatcttggccgtcctgctggggattact
ctggccctcgccctgcggccgtatcggatgacctatcgccagatcaagtacttctccttt
cctggagagctgttgatgcgaatgctgcagatgttggttcttccactaatcgtctctagc
cttatcacaggcatggcatccttggacagcagtgcttctggcaagatggggttgcgtgct
gtcgtttactatatgatgacaaccatcatcgccgtcttcattggaatctttatggtcctc
gtcatccatccaggaaaagggagcaagaaaggtctccaaggggagaacaaatatgaccag
gtccatgcaactgatgctttcatggacctcatccggaatatgtttccacccaatcttgta
gaagcctgctttagacagtataagactcaatacagtgtccgggttatcaacagaacggtt
gtgagcaacacttcttctgcggccatgttgccacagcacccaaaccaggataccaacagc
agcggtttcaactacaatgccaccatggccactttgcctctcctgccacttgaaaatgct
ttgggagtctggaataatgtcactaaagctctagggagcttcccggaagtgctgaacttt
gaggaggtcatccccggcccaggttctgtcaacggggtgaacgcccttggcctcgttgtc
ttctccatctgctttggcctggtgattggcaacatgaagcaaaagggacaccccctgcgg
gagttttttgactgcctcaatgaagccatcttgcggatggtggcggtcatcatatggtac
gcccctattgggatcctttttctgatcgctggtaagattttggagatggaggacctggca
gtgatgggaggccaattaggcctatacacactcacagttattgtgggactcctgatccat
ggcctctgtgtcctcccactcatctacttcattgtcacacgcaaaaacccctggatcttc
atggctggcctcctacaagccctcgttacggccttgggaacgtcttccagctcagccaca
ctccctgtcacattccgttgcctggaggaaaacaacagggtggataaacgagttaccagg
tttgttctgccggtgggagcaactatcaacatggatggcactgcactttatgaagctctg
gcagccatcttcattgcccaggtcaacaactaccagcttgacttcggtcagatcattact
attagcattactgccacggcagccagtatcggagctgctggcattccgcaggcgggccta
gtgaccatggtaatcgtgttgacgtctgtcggattgccaacagaggacatcactttgctt
atgactgtggactggttcctagaccgtctcagaaccaccgtcaatgtgctgggggattca
ctgggtgctggtgttgtagagcatctgtctcgccatgagctggagatgcaggatgctgag
ctcagcaactcagtccttgaagagaatgaaaaaccataccatctaatataccaagagaat
gacacccacaagcacctcaacagtgagacaccaatgtga
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