Thamnophis sirtalis (common garter snake): 106546188
Help
Entry
106546188 CDS
T06107
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1
KO
K26226
liprin-alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106546188 (PPFIA1)
Membrane trafficking [BR:
tsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106546188 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
Motif
Other DBs
NCBI-GeneID:
106546188
NCBI-ProteinID:
XP_013918455
UniProt:
A0A6I9Y9C9
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MMCEVMPTISEAEIPSGGSGNRGSGSPLQSDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNICREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKRTQADGMPDINHDQENIPSTNGKRSSN
GSLTHDEDLAKVIELQDIIEKQTKEQSQMKERITALSNRVAELEEDLDTARKDLIKSEEM
NTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSLHRQS
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALTKAEERHGNIEERLRQME
TQLEEKNQELLRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLL
REIESTKKQEELGTTHKEDQLVVNIETIRAENDQLRIRPPALHHRGPHLGSVPDFRYPLA
PSVIADNQTDSYSTSVLRRPQKGRLAALRDEPSRVQTLNEQDWERAQQASVLANVAQAFE
SDADISDGEEDRETIFSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQ
RAEEIESRVDSGSLDNPSRFRSMNSIPHPFPSGNLSGSSPPGSGISTPRRMPHSPAREVD
RLGIMTLSPVSREEIRDDKATIKCETSPPSSPRSLHLDKSYKGALHTMSQEDIRDVRNST
GSQDGQVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRSGQMNKELLGQVSALE
AESSTQDGLGLGKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMP
AWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSR
TTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHR
NSFQCGIMCLRRLNYDRKELERRREGSLNEIKDVLVWSNERMIHWVVSIGLKEYANNLIE
SGVHGALLALDETFDHNALALSLQIPTQNTQARAVLEREFNNLLVMGTDRKFEEDDDKSF
RRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTTSMSSPSMQPKKMQMDGNVSATQRLDS
ATIRTYSC
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgccaaccatcagtgaggcagagattccctcagggggaagtgga
aaccgtggttcaggttctccccttcagtcggatgctgattcccattttgagcaattaatg
gtatccatgttggaagagcgtgaccgcctcttggacacattgcgagaaactcaagagaca
cttgcattgacccagggtaaactacatgaagttggtcatgagagggattctctacaacga
cagcttaatactgcacttcctcaggagtttgcagcacttactaaagagcttaacatatgc
agagagcaactccttgaaagggaagaggaaattgcagaactgaaagcagaaagaaacaat
acaagattactactagaacatttggaatgccttgtctcccggcatgaaaggtctttaaga
atgaccgtagtaaaaagacaagctcaatctccagctggtgtttctagtgaagttgaagtt
ctcaaagcactaaagtctctatttgaacatcacaaagcccttgatgaaaaggtaagggaa
agattacgagtagcacttgaacgatgcagcttgttggaggaagaactaggtactacacac
aaagagttaatgattttgaaagaacaaaacaatcaaaaaagaacacaagctgatggaatg
cctgatattaatcatgatcaggagaacatacctagcactaatgggaagagatcttccaat
ggctctttgactcatgatgaagatcttgctaaagtaattgaacttcaagatatcatagaa
aagcaaactaaagaacagtcgcaaatgaaagagagaatcactgccctttctaacagagta
gcagaactggaagaagatcttgatacagctagaaaagatctaatcaaatctgaagaaatg
aacacaaaattgcaaagagatgtacgagaggcaatggctcagaaggaagatatggaagaa
agaattacaactcttgaaaaacgctacctcgctgcacaacgtgaagctacatctgtgcat
gatcttaatgataaacttgaaaatgaaattgctaacaaagattcattgcatcgacagagt
gaagacaagaataggcagttacaagaacgattggaactggctgaacaaaaattgcagcaa
actctgagaaaagctgaaactctgccagaagtagaggctgaattggctcagagagtagct
gcacttactaaggctgaagaaagacacggaaacattgaagaacgattgagacaaatggaa
acacagctagaagagaaaaatcaagaactactaagggctcgacaaagagagaagatgaat
gaagaacataataaacgtttatctgatacagttgataaacttttatctgaatctaatgag
agacttcagcttcaccttaaagaaagaatggcagctctggaagataaaaattcccttctc
cgtgaaattgaaagtaccaagaaacaagaagaactaggtactacacacaaagaggatcag
ttggtagtaaatattgaaactataagggctgaaaatgaccaattgaggatcagaccccct
gcccttcatcatagagggccacatttaggtagcgtaccagattttagatatccactggca
ccttcagttatagcagacaatcagacagattcctacagcacctcagttctaagacgtcca
cagaaaggacgcttagcagctctgcgagatgagccttcaagggttcagactcttaatgag
caagattgggaacgtgcacaacaagcaagtgtgctggcaaatgttgcgcaagcttttgag
agtgatgctgatatctcagatggcgaagaggacagagaaactatattcagctcagttgat
ctcttatcacctagtggtcaggcagatgcccagaccttagccatgatgcttcaggaacaa
ttggatgccatcaataaagaaattagattgatccaagaagaaaaggaaaacactgagcaa
agagcagaggagatagaaagtcgtgttgatagtggaagtttagacaatcctagtcgattt
cgatcaatgaactctatcccgcatccctttcctagtggaaacctttctggctcctctcca
ccaggtagtgggatttctactcctcgaagaatgccacacagtcctgctcgagaagtggac
agactaggaattatgacattatctccagtttctagagaagaaattagagacgacaaggct
acaataaaatgtgagacctcaccaccatcttcacctcgatcactgcatttggataaatct
tataaaggagctttgcatacaatgagccaggaagatataagagatgttcgaaattccaca
ggctctcaagatggacaagtaagcaatcccagtagcagtaatagcagtcaagattccctc
cacaaagcccctaaaaagaaggggatcaaatcctcaattggccgcctgtttggtaagaaa
gaaaaaggtcgatctggacagatgaataaggagctcttgggacaagttagtgcattagaa
gcagaaagttcaactcaggatggtttggggcttggaaaacttggaggacaagcagaaaag
aatagaaaactgcagaaaaagcatgaacttcttgaagaagctcggaggcagggtctgcct
tttgctcagtgggatggccccacggtggttgtctggctagagttgtgggttgggatgcct
gcttggtatgtggctgcttgccgtgcaaatgtgaaaagtggtgctataatgtcagccttg
tctgatactgaaatacagcgtgaaatcggaatcagtaatcctttacataggttaaaactg
agacttgccatacaagaaattatgtcactaacaagtccatcggctcctcctacatcaaga
acgactttagcctatggtgatatgaaccacgaatggattggcaatgaatggcttcctagt
ttggggcttcctcagtatcgcagttattttatggaatgtcttgttgatgctagaatgctg
gaccatttaactaaaaaagatcttcgtggtcaacttaaaatggtagacagttttcacaga
aatagcttccagtgtggcattatgtgtctccgaagattaaattatgatcggaaagaactt
gaaagaagaagagaaggaagcctgaatgaaattaaagatgtccttgtttggagcaatgag
aggatgattcactgggtggtatcaattggccttaaagaatatgcaaataaccttatagaa
agtggagttcatggtgcacttctggccttagatgaaacttttgatcacaatgcattagct
ctttctttacaaataccaactcagaatacacaggctcgtgctgtcttggagagggaattt
aataatcttcttgtgatgggtacggacagaaagtttgaagaggatgatgataaaagcttt
agacgagcaccttcatggagaaagaagttcagaccaaaggatataaggggtttagctgct
ggatcagcagagaccctccctgcaaattttagagttaccacttcaatgtcttcaccttct
atgcaaccaaagaagatgcagatggatggcaatgtatcagcaacacaaagattggattct
gctacaataagaacttattcatgttaa
DBGET
integrated database retrieval system
