Thamnophis sirtalis (common garter snake): 106546274
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Entry
106546274 CDS
T06107
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
tsr03015
mRNA surveillance pathway
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106546274 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
106546274 (RBM8A)
03015 mRNA surveillance pathway
106546274 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106546274 (RBM8A)
03041 Spliceosome [BR:
tsr03041
]
106546274 (RBM8A)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106546274 (RBM8A)
Spliceosome [BR:
tsr03041
]
Complex C
Other components
EJC/TREX
106546274 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
106546274
NCBI-ProteinID:
XP_013918587
UniProt:
A0A6I9XWN3
LinkDB
All DBs
Position
Unknown
AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRSGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtgctggaccttcacgaggctgggggcgaggacttcgccatggacgaggac
ggcgacgaaagcatccacaaattgaaggaaaaggcgaagaaaagaaaaggcagaggcttt
gggtcagaggaaggttccagagcccgagttcgcgaggattatgacagcgtggagcaagac
ggggacgaaccgggacctcagagatcggtagaaggttggatcctctttgtcacgggggtc
cacgaggaggctacggaggaggacatccacgacaagttcgccgagtttggggagatcaag
aacctccacttgaatcttgaccggcggacaggatatctgaagggttacacgctggtggaa
tacgaaacctacaaagaagcccaagcagcgatggagggcctgaatggacaggatctgatg
gggcagcctatcagcgtggactggtgctttgtcagagggcctccgaaaggaaaacgaagg
agtggccgcagaagaagccggagtcctgatcgaagacggcgttga
DBGET
integrated database retrieval system
