Thamnophis sirtalis (common garter snake): 106546388
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Entry
106546388 CDS
T06107
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase-like
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106546388
Enzymes [BR:
tsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106546388
2.7.7.52 RNA uridylyltransferase
106546388
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106546388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gag_p24
Gag_p24_C
PAP_assoc
DUF447_C
Motif
Other DBs
NCBI-GeneID:
106546388
NCBI-ProteinID:
XP_013918729
UniProt:
A0A6I9XRP7
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MIKELKNAVKDYGITSHYSRGLLNSLAGAYQLLPQDWKDLARMLLNGTQYVVFESEYKRK
AMNRATRPGAQWTMEQLFREGAFATLLTQAQALTPLAFSFVNECVMAALSRVDESGTPIQ
SFSAIKQTATESYSDFINRLQKAVERQISNKEAAAEILMKLAFEHANADCQSVLKPLASC
LAPTLADYLKACCSLLAEFFRIFESYNFTSGVISLREGRLLPLPDFLLSDAGQKFKVGPI
NLQDPFELSHNVAANVNEKTALRLQRSCQDAAKYCRSLQYQRKSSKGKSWGLVRLFQPGS
SQAPEHLVILLPLTPATQSRSELHPSRDSSQLPFRRVCAGISYVLQHVLKCSCSENPQGP
GDDGESFGSDPEEDHLKTKTEQLSVGSKRSLDLEDAALGAPPAKKSRMEVSLPDTESVSW
DCAAWHRVWLGRRRVRRQFSSPQADPKTSADPLELEGKVSEAISQQEGQTRPVDPLFGFN
VCATIKDGGSGEQDPQVNLNFTPDPEQGGVFQDFFHFLQCFLPRMVEQYLATKQPPDLCP
PEEKSSPPVGDI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagaattaaaaaatgcggtaaaggattatggaattaccagccactactccaga
ggacttcttaattctctagcgggtgcctatcaactgctaccacaggattggaaagacttg
gctcggatgttgcttaatggaacccagtatgtggtgtttgagtccgagtacaaaaggaaa
gccatgaatagggcgacacggccgggagcccagtggaccatggaacaattatttagggag
ggtgcctttgccacactcctcacccaggcgcaggccttaacaccccttgctttttcgttt
gtcaacgaatgtgtaatggctgccttgtcccgtgtagatgaatctggtaccccgattcaa
tccttttctgccataaaacaaactgcaaccgaatcttattccgattttattaaccgccta
caaaaggcagtggagagacaaatttctaacaaggaagcagctgctgaaattcttatgaaa
ttggcatttgaacatgcaaacgcggactgccagtctgtccttaaacctttggcatcctgc
ctggcgccaacccttgctgattatctcaaggcttgttgctccctcctggcggagtttttc
cgcatcttcgaaagctacaatttcaccagcggtgtcatctccctgcgtgagggccggttg
ctccctctccccgatttcctgttatccgacgctggtcagaaattcaaggtgggccctatc
aacctccaggatccctttgagctgagccacaatgttgcagccaacgtcaacgaaaagacg
gcgctgcgccttcagcggagctgccaagacgccgccaaatactgccggagtttgcaatac
cagcgtaaatccagcaaggggaagagctggggcctggttcgtctcttccagcccggcagc
tcccaagccccagaacacctggtcatcctcctccctttaacgccggccacacaatcccgc
tcggaattgcatccgagcagggattcctcccagctcccgtttcggagggtgtgcgcaggc
atctcgtacgtcctgcagcatgtgttgaaatgcagctgctcggagaatccgcagggaccc
ggagacgatggggaatccttcggcagcgatccggaggaggatcacctgaaaacgaaaacc
gaacaattgtcggtgggttccaagcgatctctggatctagaagacgccgcgttgggggct
ccccctgcgaagaaatcacggatggaggtttcgcttcccgacacggaaagtgtgagctgg
gactgcgccgcctggcaccgcgtctggttaggaagacggcgggtccggcgacagttcagc
agcccgcaagcggatcccaaaacatccgctgatcccttagagctggaaggcaaagtatcc
gaggcgatttcccaacaagaggggcagactaggccagtcgatccgctgttcggattcaac
gtttgcgccacgatcaaagacgggggttccggggaacaggatccccaagtcaacctcaat
ttcactccagaccctgaacagggaggagttttccaagatttttttcatttcctgcaatgt
ttcctgccccgaatggttgagcagtacctggccaccaagcagcctccagacctctgtccc
ccggaagaaaaatcttctcctccagtgggggacatttga
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