Thamnophis sirtalis (common garter snake): 106546406
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Entry
106546406 CDS
T06107
Symbol
SLITRK1
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106546406 (SLITRK1)
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_LRWD1
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
106546406
NCBI-ProteinID:
XP_013918751
UniProt:
A0A6I9XY82
LinkDB
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Position
Unknown
AA seq
691 aa
AA seq
DB search
MLLWILLLETSLCLAAGNVTGDVCKEKICSCPEIEGDLHVDCEKKGFTSLQRFSAPTSQF
YHLFLHGNSLTRLFPNEFANFYNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKLKS
FRKQTFLGLDDLEYLQADFNLLRDIDQGAFRDLNKLEVLILNDNLISILPANVFQYVPIT
HLDLRGNRLKTLPYEDVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVI
CEAPTRLQGKDLNETTEQELCRKTRVDSSLAAPPAEEETCDPGPIPTPFKIHGKEDAATP
GSAPHGGTKIPVNWQIKSRPTVASSIHTMKGKSSSSTPCPATCTCHQIPGGFKVNCNDGN
ISSLVDLKPKPSNLHELFLRGNKIHTIRKSHFVDYQKLNLLDLGNNNIATMENNTFKNLL
ELVWLYMDNNYLDILSREKFNGLQNLEYLNMEFNVIQLIQPGTFNAMPKLRVLILNNNLL
RSLPVDVFAGVSLSKLSIHNNYFLYLPVAGVLDQLTSITQIDLHDNPWDCKCPIVPFKQW
VEMLRPKVMMSDLRCETPEEFFKEDFESLSNEAICPQLKVMPTLTSTHKNSTGLAETGTH
SNSYLETSRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDANSSASEINSLQ
TVCDSSYWHNGPYSTDGAHRVYDCGSHSLSD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggatcctcttgctggagacgtctctttgtttggctgccgggaacgttacg
ggggacgtttgcaaagagaagatctgctcgtgccccgagatcgaaggcgacttgcacgtc
gactgcgagaagaagggcttcaccagcctgcagcgtttctcggcccccacgtcccagttc
taccatttgttcctgcacggcaattccctcacgcgccttttccccaatgagttcgctaac
ttttacaatgcagtcagtttgcacatggaaaacaacggcttgcacgaaattgtgccggga
gctttcctggggctgcagttggtgaagaggctgcacatcaacaacaacaagctgaagtct
tttcgcaagcagactttcttggggctggatgatctggaatacctccaggctgattttaat
ttattgagggatattgaccaaggagccttccgggacttaaacaagctggaggtgctgatt
ttgaacgacaatctgatcagcatcttacctgccaacgtgttccagtatgtgccgattacc
catttggatctacgaggtaaccgcctgaaaaccttgccttacgaggatgttttggaacag
atcccaggcattgctgagatcctgctggaggacaacccttgggactgtacctgcgatcta
ctctccttgaaagaatggctggagaacatccccaaaaatgctttgatcggccgggtgatt
tgtgaagctcccacacgtttgcaggggaaggatttaaacgagacaaccgaacaggagttg
tgcaggaaaacccgggtagattccagccttgcagctccccctgcagaagaggagacttgt
gatcctggccccattcccactccttttaagatccatggcaaggaagatgctgccacgcca
ggttctgcccctcatggaggtaccaagatcccagtcaattggcaaatcaaatccagacct
acagtggccagctcaatccacaccatgaaaggcaagtcttccagcagcactccctgccct
gccacctgcacttgccaccagatccctggagggttcaaggtaaactgcaatgatggcaac
atcagcagcctggtggacctgaagcctaagccatccaacctccatgaactcttcctaagg
ggcaacaagattcacaccattcgcaagtcccattttgtggattatcagaaactcaaccta
ttggacttgggcaacaacaacattgccactatggaaaacaatactttcaaaaacctgctg
gagctggtgtggctctacatggacaataattatttagacatactctctcgagagaagttc
aacggtttgcaaaacctagagtacctaaatatggaatttaatgtcatccaactcatccag
ccagggacctttaatgccatgcctaaactgagagtactgattttgaacaacaatcttctg
aggtctctgccagttgatgtttttgctggagtctccctctctaagctcagcatccacaac
aattacttcctttatctgccggtggcaggagtgctggatcagctcacctccattacccaa
atagatctgcatgacaacccatgggactgcaaatgtccaattgtccctttcaaacaatgg
gtggagatgctgaggccaaaggtgatgatgagtgacttaaggtgtgagaccccagaagag
ttctttaaggaggactttgaatctctgtccaatgaggccatttgccctcagctcaaagtc
atgcccactttgacttccacccataagaacagcactggcttggcagagactgggactcac
tctaattcctacttggagactagtagggtctccatctcagtgctggtgcctggccttttg
ttggtgtttgtcacctctgccttcaccgtggttggcatgctcgtcttcatcctgaggaac
cggaaacgctccaaaaggagggatgccaactcttctgcctcagagatcaactctttacag
acagtatgtgactcctcctactggcacaatggaccctatagtacagatggagcccacaga
gtgtatgactgcggttctcactccctatcagactga
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