KEGG   Thamnophis sirtalis (common garter snake): 106546498
Entry
106546498         CDS       T06107                                 
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04620  Toll-like receptor signaling pathway
tsr04621  NOD-like receptor signaling pathway
tsr04622  RIG-I-like receptor signaling pathway
tsr04623  Cytosolic DNA-sensing pathway
tsr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    106546498 (IRF7)
   04621 NOD-like receptor signaling pathway
    106546498 (IRF7)
   04622 RIG-I-like receptor signaling pathway
    106546498 (IRF7)
   04623 Cytosolic DNA-sensing pathway
    106546498 (IRF7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106546498 (IRF7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tsr03000]
    106546498 (IRF7)
Transcription factors [BR:tsr03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    106546498 (IRF7)
SSDB
Motif
Pfam: IRF-3 MH2
Other DBs
NCBI-GeneID: 106546498
NCBI-ProteinID: XP_013918858
UniProt: A0A6I9Y4G3
LinkDB
Position
Unknown
AA seq 421 aa
MAGSAVPNENAADNFYQTNDDTLQWIIQQSQLNLTEMQHVSWAPTVITDSNNLIAGNAIT
YEQRSSCEAPQVTQNGCSPIGNGVAVEPVASDCYQEGPHWPPANPTKEISQSTIAFSHVQ
QNFPGANQFNQLEEAICNTSCFVDNIYLNEEPRDNGMRNNEMRNDYPLTANPEVMMEQST
FVPSATLPTDEPTINNVPSQDPLETAAFNIKVSIYYHNKIVRDEAEVNSCLLTYNQENCH
QSHNAQVIQFPNPDMLTDQKRVEKTLFVLETARLLLYQKNGRIWAKRLGMCQVFHAFSKE
LDNRSQDPPCKLLPRNVETEIFNYEQFYQELVEFRDGQRRSSPDYTIYLCFGQRFTASKP
KESKLILVKLVPNFCKNSHEFVQREGCSSLNSESLSLQISNSLFDMIEQLSTIFMQTETA
Y
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcaggttctgcagtgccaaatgagaatgcagcagacaatttttaccaaaccaatgat
gacacactccagtggattattcagcagtcccaactaaatctgactgaaatgcaacatgtc
tcatgggccccaacagtaattacagattccaataatcttatagcaggaaatgctattacg
tatgagcaaagaagttcctgtgaagcccctcaggtcacccaaaatggctgctcacccata
gggaatggagtagcagttgaacctgtggcaagtgactgttaccaagaaggaccccactgg
ccacctgcaaatccaacaaaagagatttcccagtcaaccattgctttttcacatgtgcaa
caaaattttcctggtgcaaatcaatttaatcagttagaagaagctatctgcaatactagc
tgtttcgttgataacatttatctgaatgaagagcctcgggataatggaatgagaaataat
gaaatgaggaatgactatccgcttacagcaaacccggaagttatgatggaacagagtaca
tttgtaccttcagctactctcccaacagatgaaccaactatcaataatgttccttctcag
gaccctctagaaactgctgcatttaacataaaagtctctatctactatcacaacaagata
gtgcgtgacgaagcagaagtaaatagctgcctgctcacctacaaccaggagaactgccac
caatcacacaatgcacaggtcatacagtttccaaatccagacatgctgacggatcagaag
cgagttgaaaagaccttgtttgtcttagagactgcacgtttattattatatcagaaaaac
gggaggatctgggccaagcgacttggaatgtgtcaggtcttccatgcgttctccaaggag
ctggacaatcgttctcaggaccctccatgtaaattactgccaaggaatgttgaaactgaa
atcttcaactatgaacagttctatcaagaactggttgagttccgtgatggtcaaagacgc
tcgtctcctgactataccatttatctgtgctttggacagcggtttactgcttccaaaccc
aaggagtccaagctgatcttggtgaagctggttccaaatttttgtaaaaattcgcatgaa
ttcgtgcagagggaaggctgctcatccctgaacagcgaaagtctgagcctccaaatctcc
aacagcctttttgatatgatagaacagctttctactatattcatgcagactgagacagcg
tattga

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