Thamnophis sirtalis (common garter snake): 106546531
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Entry
106546531 CDS
T06107
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106546531
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106546531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_LMN_ATRN
LAMB1
ATG17_like
ATG16
DUF4164
Ntox1
Tox-HDC
DUF948
Motif
Other DBs
NCBI-GeneID:
106546531
NCBI-ProteinID:
XP_013918893
UniProt:
A0A6I9Y4H7
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
HGIYGRQCDQCLPGYWGFPSCQACQCNGHADECDPYSGQCLRCRDHTSGPNCERCLAGFY
GDPILGSGDHCRPCPCPDGPESGRQFANGCYQDRITLQVVCVCERGYKGSRCDECASGFF
GNPEEVGGRCHPCQCNNNIDSSDPEACDKRTGLCLRCLFHTQGEHCQECKPGYYGWALQQ
DCRKCVCNYLGTVPHHCNSSEDCDCEKETGQCQCLPNVAGQNCDHCAPNTWNLSSGTGCE
TCACNPEHSFGPSCNEFTGQCQCMPGFGGRTCTECQEYFWGDPTIGCQACECDSRGIQTL
QCNRSTGQCICREGVEGPRCDKCTRGYSGIFPDCAPCHQCFALWDVIVTELTNRTQRFLE
RAKVLKITGVSGPYRETLSSVEEKLNEIKSIIAQNPATEPLKNIGDLFEEAEKLKADVAQ
KIIEVEEKISTVANESSAVEAELTALEADAKSLHNAVKELGEQLEFIKISDVRGALDSIT
KYFQMSLDAEKRANASVLLPGSLIEQSAEMRLEVESLINETAATFQATQEEQSRLLDELA
GKLQSLDLAEVSEKMCGTPLGSSCADSPCGGLSCQTEDGVKKCGGPGCEGLVTVAHTAWQ
KAIDFDRDILSALAEVEQLSKMVSEAKQRADEAKQNAQDILLKTNATKEQVDQSNKDLRN
LIHQIRDFLMKDGADLDSIEAVANEVLNLEMPSTPEQLQTLAENIRDRVESLSDVETVLQ
QSAGDIARAKTLLDEAKKASKSATDVKVTADMVREALEEAGRAQTTAEDAIKLAEKDIEG
TQGLLASIASETGSVEDRLGNATLRIAELEKNVETLRQKAATNGEDLKVAEENIAAVNRT
TADVQKILDDSVNEKYKTVENLIAKKTGESASARKKAEELQNEAKVLLEQANSKLQLLKE
LEDTYEKNQKILEDKAKQVIELEETVRGLLQAISQKVAIYSTC
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
catgggatttatggccgtcagtgtgaccaatgtttgcctggatattgggggttcccgagc
tgccaggcgtgccagtgcaacgggcatgcggacgagtgtgatccgtacagcgggcagtgt
ttgcgttgccgtgatcacacctcgggacccaattgtgagaggtgcctcgctggtttttat
ggagatccaatcttgggatcaggtgatcactgccgtccttgtccttgcccagatggaccg
gaaagtgggcgccagtttgccaatggatgttatcaagaccggattacattacaagtggtg
tgcgtttgtgagagaggatataaaggaagcagatgtgacgaatgcgcctctggcttcttt
ggaaaccccgaagaggttggtgggagatgccatccctgtcagtgcaacaacaacatcgac
tcctctgacccggaggcttgtgacaaaaggaccgggttgtgtctccggtgtttgtttcac
acccaaggcgaacactgccaagagtgtaaacctggctactacggatgggcccttcaacag
gattgtagaaaatgtgtctgcaattacctgggaaccgtgcctcaccattgcaacagctcc
gaagactgcgattgtgagaaagaaacaggccagtgtcagtgtctccccaatgtggctgga
cagaattgcgatcattgcgccccaaacacatggaatctgagcagtgggaccggatgcgaa
acctgcgcctgtaatccggaacattccttcggcccgtcttgcaacgagttcactgggcag
tgccaatgcatgccaggattcggcgggcgcacctgtacagaatgccaggaatatttctgg
ggtgaccctaccatcggctgccaagcttgcgagtgcgattcccgaggcatccagactctc
caatgtaaccggtcaaccggccagtgcatctgcagggaaggcgtcgaaggtccccgttgt
gataaatgcacccgaggctactcgggaatctttccagactgtgctccttgccatcagtgt
tttgctctctgggacgtcatcgtcaccgagttgaccaataggacccagagattcctggaa
agagccaaagtcctgaagatcacgggggtgagcggcccctaccgagagaccctcagctcg
gtggaggagaagctgaatgagatcaaaagcatcattgctcaaaatcccgcgaccgagccc
ctcaagaacattggggacctcttcgaagaagcagagaagctgaaagcagatgtggcccaa
aagatcattgaagtggaggaaaagatctctacggtggcaaacgaaagcagcgccgtggag
gctgagctgacggcgttggaggcagacgccaagagcttacacaacgctgtgaaagaactt
ggggaacagctggagttcataaaaatctcggacgtccgaggtgccttggatagcatcacc
aaatatttccagatgtctctggatgcggaaaaaagagccaacgcatcagttttgcttccc
ggcagcctcattgaacagtccgccgaaatgcgcctggaagtggagagtctgatcaacgag
acggcggccaccttccaggctacacaggaagaacagtcccgtctcttggacgaactggcg
ggcaagctgcaaagtctcgatttggccgaagtgtcggagaagatgtgtgggactcccctg
gggtcttcctgtgccgattccccctgtggtgggttgagctgccaaactgaagatggggtg
aagaaatgtgggggacccgggtgtgaaggtctggtgacggtggctcacaccgcctggcag
aaagccatcgattttgaccgggacatcttgagcgctctggcggaggtggaacagctgtct
aaaatggtttcggaagccaaacaacgggccgacgaggccaagcagaacgcgcaggacatt
ttactgaagaccaacgccaccaaggagcaagtagaccagagcaacaaggacctcagaaat
ctgatacatcagatccgagattttttgatgaaagacggggccgatctggatagcatcgaa
gccgtcgctaacgaagtcctcaacctggagatgcccagcacacctgagcagctgcaaacc
ctggccgagaacatccgggaccgggtcgaaagcctgtcagatgtggagactgtccttcag
cagagcgctggagatatcgcgagggccaagaccttgttagatgaagctaagaaggccagt
aaaagcgcaacggatgtgaaagtcacggcggatatggtcagagaggctctcgaagaagct
ggaagagcccaaaccacagctgaagatgccatcaaactagcagaaaaagatattgaagga
acccaaggcttgcttgcttctattgcatcggagaccggctcagtggaagatcgtttgggg
aacgcgacccttcgcattgcggagttggagaagaacgtggaaacgctgaggcagaaggct
gctaccaacggagaggatctcaaagtggcggaagaaaatatcgcggcagttaatcgaacg
accgccgacgttcagaagatactagacgacagcgtcaatgagaaatacaaaacagtagaa
aacttaattgccaagaaaacaggggagtctgccagcgccaggaagaaggcggaagagctg
caaaacgaagcgaaggttttgttagagcaagcaaacagcaaacttcagcttctcaaagaa
ctggaagacacgtatgaaaaaaaccaaaaaatcttggaagacaaagctaaacaagtaata
gagctggaagaaaccgtccgaggccttttgcaagcgattagtcagaaagttgcgatttat
agcacctgctag
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