Thamnophis sirtalis (common garter snake): 106546542
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Entry
106546542 CDS
T06107
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
tsr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106546542
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
106546542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106546542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106546542
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
106546542
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106546542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
106546542
NCBI-ProteinID:
XP_013918904
UniProt:
A0A6I9XS67
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKTTTKKASTKKVARKSKKQGEVSKSASADSTTEGTPTD
GFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGSTLEKRGGKEF
LEAVVELRKKNGPLDTAGAVVSSGHGLPAKFVIHCNSPSWGSDKCDELLEKTVKNCLALA
DEKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIGI
YVQEMAKLDAN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaggggtggaaagaaaaagtcaaccaaaacatctcgctcagcaaaggctggg
gtcatattccctgttgggcgaatgcttcgttatattaagaaaggtcatccaaaatacaga
attggggtcggtgctccagtatatatggcagcagtacttgaatacttgactgcggaaatt
cttgaattggctggaaatgcagcacgagataacaagaaaggtcgtgtcacccctagacat
atcttgctggctgtagcaaatgatgaagaattaaatcagctgttgaaaggtgtcaccata
gccagtggtggtgtattaccaaatattcacccagagctgttggccaaaaagcggggttca
aaaggaaaattggaagcaatcatcactccacccccagctaaaaaagcaaagtcaccgtca
cagaagaaaaccacaacaaagaaagcaagcacaaagaaagtagcaagaaagtctaagaaa
cagggagaagtcagtaaatcagcaagtgctgacagcacaacagaaggcaccccaacagat
ggtttcactgtcttatccaccaaaagtctatttcttgggcaaaagctgaacctaattcac
agtgaaatcagtaatttagccggcttcgaagtggaggccattatcaatcccaccaatgct
gacattgaccttaaagatgatctaggaagcacattggagaagcggggtggaaaagaattc
ctggaggctgttgttgaacttcgcaaaaagaacggcccattggacacagcaggagctgtt
gtcagttcaggacatggattgcctgcaaaatttgtcatccactgcaacagccccagttgg
ggttcagacaaatgtgatgagttgttggaaaagacagtgaaaaactgcttagcactggca
gatgaaaagaagttgaagtcaattgcatttccttccattggaagtggcaggaatggtttc
ccaaagcagactgcagctcagctgatcctgaaagccatttccagctattttgtatcaaca
atgtcctcttcaatcaagacagtctattttgttctctttgatagtgagagtatagggatt
tatgtgcaagaaatggccaagttagatgccaactaa
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integrated database retrieval system
