Thamnophis sirtalis (common garter snake): 106546555
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Entry
106546555 CDS
T06107
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106546555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106546555
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106546555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
T5orf172
zf-RING_11
zf-RING_5
Zn_ribbon_ACC
DUF2616
Motif
Other DBs
NCBI-GeneID:
106546555
NCBI-ProteinID:
XP_013918922
UniProt:
A0A6I9XXN5
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MSRPHGEKLQYCTNPRYQGRIYIGFTVNPERRIDQHNGGKRCGGAWKTSGRGPWDMVLIV
HGFPSDVAALRFEWAWQHPHSSRRLNHVTRRKTRERQFDFHLRVLAHMLQTAPWCRLPLT
IRWLKQQYCREFPPGLEPPLHMPIAFGPVRAVKDTKRAEPSSPEEQVMTTKHCSVCLKTF
QDGDKDIPLHCFHPTCTMAAHIFCLSHLFLEKEPNHILPIEGQCPGCKNLILWGDLIRHH
KGCYGNIEADPTSSQKHWADELQP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccacacggggaaaaactgcagtactgcaccaatccccgttaccaggggagg
atctacattggtttcactgtcaatcccgaacgacgcatagaccaacacaatggtgggaaa
cggtgtggtggggcctggaagacgagtggacgtgggccatgggacatggtgttgattgtt
catggtttcccctctgatgtagctgctttgcgctttgaatgggcctggcaacaccctcac
tcatcccgccgtctcaaccatgtcacccgccggaaaacacgggagcgtcagtttgacttc
cacttgcgtgtcttagcccacatgctgcaaactgccccatggtgccgtctgcccctcacc
atacgatggctcaagcagcagtactgccgagagttccccccaggcttggaacctccctta
cacatgcccatagcctttgggccagttcgagctgtcaaagacactaagcgtgctgaacca
tcatctccagaggaacaagtgatgaccacaaagcattgtagtgtctgtctgaagactttt
caggatggggataaagacattcccttgcactgttttcacccaacttgtactatggctgct
catatattttgcctgtctcatcttttcctggaaaaggaacctaatcatatcctgcccatc
gaaggacagtgcccgggctgcaaaaatcttatcctttggggagatctgattcgtcatcat
aaaggttgctatggtaacatagaggccgatcccacctcctctcagaaacactgggctgat
gaactgcaaccatga
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