Thamnophis sirtalis (common garter snake): 106546559
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Entry
106546559 CDS
T06107
Symbol
CORO1A
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106546559 (CORO1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106546559 (CORO1A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106546559 (CORO1A)
04147 Exosome [BR:
tsr04147
]
106546559 (CORO1A)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Coronins
106546559 (CORO1A)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106546559 (CORO1A)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106546559 (CORO1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Trimer_CC
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
106546559
NCBI-ProteinID:
XP_013918927
UniProt:
A0A6I9XXN7
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSRKVVRSSKFRHVYGQPVKADQCYDDIRVSQMTWDGNFCSVNPQFLAIVVEASGGGAFL
VLPLSKTGRLDKAHPVVSGHTAPVLDVEWCPHNDHIIASASEDCSVMVWSVPEGGLTRSL
NEPLVTLEGHSKRVGIVTWHPTAQNLLLSAGCDNVVKVWDVSVGQAAISLDELHPDVIYS
AAWNQDGSLLCTACRDKHVRLFDPRTGGNAANELPRAHEGSRPVRATTVKDGKLFTTGFS
RMSERQVALWDLRNPEEPLTLQELDTSSGVLLPYYDPDTNVVYLTGKGDSSIRYFELTGE
APYVHYLSMFTSKESQRGGGWMPKRGLDVSKCEIARFYKLHERKCEPIAMTVPRKSDLFQ
EDLYPDTAGPDPALTSEEWLAGKNASPILISLKDGYIPQKSREFKVNQTLLQGPKRSQLP
HERTQQGGPTLEQFSEDLKRLQISVSEQERRILELERIVKE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaaagttgtgaggtccagcaagttccggcatgtctacgggcaaccggtgaag
gctgaccaatgctatgatgacatccgtgtttctcaaatgacctgggatgggaacttttgc
tctgtcaacccccaattcttagccatcgtcgtggaggccagtggtggaggagccttcctg
gtcctgccattgtccaagactggtcgcctggataaggcccaccctgtggtctcagggcat
acagcgcctgtgttagatgtagagtggtgtccccacaatgaccatattattgccagcgca
tccgaagactgcagtgttatggtctggtcggtgcctgaaggtggccttacaagatctttg
aatgaacctctggtgactctggaaggccactctaagagggtggggattgtgacatggcac
ccaacagcccagaaccttctgctgagtgcaggctgcgacaatgtggtgaaagtctgggac
gtgagtgttggacaagcggccatttccttggatgagttgcacccggatgtcatctacagt
gcagcttggaaccaggacggctctttgctctgcacagcctgccgggataagcacgtgcgg
cttttcgacccccggaccgggggcaacgctgcaaatgaattgccccgcgcccacgagggg
tctcgccctgttcgggccacgactgtgaaggatgggaagctttttacaacaggtttcagc
cgcatgagcgagcgacaggtggccctgtgggatctgagaaatcctgaggaaccattgaca
cttcaggaactagatacaagcagtggtgttctcctgccttactatgacccagacaccaac
gtggtttacctgactggcaagggtgacagcagtatccggtacttcgagctgactggcgaa
gcgccctacgtgcactatttatccatgtttacttccaaggagtcgcagcgaggaggggga
tggatgcccaaacgagggctggatgtcagcaagtgcgaaattgccagattttacaaacta
cacgagaggaaatgtgagcccattgctatgacggtgccccggaagtcagacctgttccaa
gaggacctgtatcctgacacagctggtccagatcctgccttgacctcagaggagtggcta
gcaggcaagaacgcaagcccaatcctcatttccctcaaggatggctacattccccagaag
agccgagagttcaaagtcaaccagactctcctgcaggggcccaaaagaagtcaacttcca
cacgaaaggacacagcaagggggcccaactttagaacagttctcagaggacctgaaacga
ctgcaaatttctgtgtcggaacaggagcgacgcatcttggagctggaaaggattgtgaag
gaatag
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