Thamnophis sirtalis (common garter snake): 106546679
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Entry
106546679 CDS
T06107
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106546679 (DHX35)
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106546679 (DHX35)
Spliceosome [BR:
tsr03041
]
Complex C
Other components
Complex C specific factors
106546679 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_7
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
106546679
NCBI-ProteinID:
XP_013919086
UniProt:
A0A6I9XYZ6
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAAPVGPLKFWKPGTEGPGVSLSEERQNAAESSSVSVIYNPFISLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIVGETGCGKSTQIPQYLTEAGWTAEGRIVGVTQPRRVACVSIAERV
AEERGALLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVIMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIIASATLDAEKFRDFFNQNESSDPSKDTSMILTVEG
RTFPVDVFYIQSPVPDYVKSTVETVMKIHNSEGDGDILAFLTGQEEVETVVSMLIEQARI
IARTGMKKHLRVLPMYAGLPAAEQMKVFERMPHNVRKVIVATNIAETSITINGISFVVDC
GFVKLRAYNPKTAIECLVVVPISKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPQSTIP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDKYCRLTEPLG
IRIAEFPLNPMFAKMLLESGNFGCSQEILSIASMMQIQNIFTIPPNQKVLAIREHRKFAV
EEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRATIVREQLKKLLVKFKVPKKSSE
GDPDPVLRSIVSGFFANAARFHSTGCYRTIRDDHELYIHPTSVLYAEKPPRWVVYNEVIQ
TSKYYMRDVTAIKSAWLLELAPHFYQQGTVRARHGLQTNMDVHPESLFQTPLSILLFTSL
QRSLTHQCMICTMSFCCMCNLTKFNSSLWIYGFSPPSLFVSSIGLSFIFCVLCKVQNSAD
APNESLKSSSFKEFAKSWDT
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgggtccgttgaagttttggaaaccgggcacagaaggaccaggtgtc
agcctctcagaggaaagacagaatgctgctgaaagttcaagtgtttcggtcatctataat
ccctttatttccctttctattgagcaacagaggcaaaagctgcctgtttttaagcttaga
aatcatatcctctatctagtagaaaactatcagacattagtgattgttggagaaacagga
tgtgggaaaagcactcagattccccaatatctaacagaagctggttggactgctgaaggc
cggatagtgggagtaacacaacctcggagagttgcttgtgtttcaattgcagagcgggta
gctgaagagaggggtgccttgctgggccatgaagttggatattgcattcgatttgatgat
tgtactgacccacaggctacaagaattaagtttctgacagatggaatgctggtcagggaa
atgatggctgacccattactaaccagatatagtgtcatcatgttggatgaagctcatgaa
agaactttatatacagatattgccattggcttattaaaaaaggttcagaaaaaacgagga
gatcttcgcttgattatagcatctgctacactggatgctgagaaatttagggatttcttt
aaccaaaatgagagcagtgacccaagcaaagataccagcatgatccttactgtggaagga
cggacgtttccagtggacgtcttctacattcagagtcctgttccagattatgtgaagtca
actgtggaaacggtcatgaaaattcataattcagaaggtgatggcgatatactggcattt
ttaactggccaggaagaagtagaaacagttgtttctatgttgatagaacaagctcgaatc
atcgctcgcacaggcatgaagaagcacctgcgtgtccttcctatgtacgctggattgcct
gctgctgagcagatgaaagtttttgaaaggatgcctcataatgtgagaaaggtgatagtg
gctactaacattgcagagacctctatcacaatcaatggcatttcatttgttgttgactgt
ggctttgtgaagcttcgtgcatataatcccaaaacagctattgaatgtcttgtggttgtt
ccaatctcgaaggcctcagctaatcagagagctggtcgtgctggacggaatcgctcagga
aaatgttacagactttacacagaggaagactttgagaagttgccacagtccaccattcct
gaaatgcaacgcagtaacctggcaccggttatattgcagcttaaggcattaggaattgac
aatgtgcttaggtttcccttcctctcacctccaccagctcagtcaatggtgcaagctctg
gagctgttgtatgccttaggaggactggataaatattgtcgtctcactgaacctctggga
attagaatagcagagttccctttaaatcctatgtttgcaaagatgctcctagaatcagga
aattttggctgctcccaagagattctgagcattgcatccatgatgcaaatccaaaatatc
ttcacaattcctccaaaccaaaaagtactagctataagagaacacagaaaatttgctgtt
gaggagggtgaccacctcacgatgcttaatgtctatgaagcttttataaaacacaacaaa
agctctcagtggtgtcaggaacactttctgaattataaaggtcttgttagagccacaatt
gtaagggagcagctgaaaaaacttcttgtcaagttcaaagtgccaaaaaaatctagtgaa
ggtgatccagaccctgttctaagatctattgtttctggattttttgctaatgcagccaga
tttcattctactgggtgttacaggactattcgtgatgatcatgaactctacatacatccc
acctcagtgttgtatgcagagaaacctcctcgttgggtagtgtacaatgaagttatccag
acttcaaagtattacatgcgagatgttacagctattaaatctgcttggttattggaactg
gctcctcatttctatcagcaaggaacggtacgggctcggcatggactccaaacgaatatg
gatgtgcatcctgagtcactttttcaaactcctctttccattctgcttttcacaagtctg
cagagaagcttgacccatcaatgtatgatctgtacaatgtctttctgctgtatgtgcaac
ttaacgaagtttaattccagtctgtggatctatggtttctctcccccatccctgtttgtg
agttccataggcttatcttttattttttgtgtactatgtaaagtccagaatagtgctgat
gctcccaatgagtctctaaaaagctcttcctttaaagagtttgcaaagtcctgggataca
taa
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