Thamnophis sirtalis (common garter snake): 106546715
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Entry
106546715 CDS
T06107
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106546715 (LINGO1)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
106546715 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
ig
Ig_2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
106546715
NCBI-ProteinID:
XP_013919133
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MVAGKWSMYCPILACWQPILILMLGSILSGSATGCPPRCDCSAQERSVTCHRKRYMTVPE
GIPTETKLLDLGKNRIKTLNQDEFVNFPHLEELELNENIISGIEPGAFNNLFHLRTLGLR
SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAF
SGLNSLEHLTLEKCNLTSIPTEALSHLHGLIVLQLRHLNINAIRDYSFKRLYRLKILEIS
HWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSLRHLVYLRFLNLSYNPITSIEGSML
HDLLRLQEIQLVGGQLLVVEPYAFRGLNYLRILNVSGNLLNTLEESAFHSVGNLETLIID
NNPLACDCRLLWIFRRRWRLNFNKRQPTCATPEFVQGKQFKDFSEALLPNYFICRRSRIR
DRKPQQIFVDEGHTVQFICRADGDPPPVIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYA
QIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIS
SAADPPRKFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggggaagtggagtatgtattgcccaatcttggcctgttggcagccgattctc
atcttgatgttgggatccatcctctcaggctctgccacgggttgcccaccccgctgtgac
tgctcggcccaggaacgctcggtgacttgccaccggaagcgatacatgaccgttcctgag
ggcatccccaccgagaccaaacttttggatttggggaaaaaccgcatcaagactctcaac
caggacgagtttgtcaattttcctcacttggaggagttggagttgaatgagaacatcatc
agcggcattgagccaggggctttcaataacctcttccacctcaggactctgggtctcagg
agcaaccggctcaaacttatccccctcggagtgtttacgggactcagcaacctcaccaag
ttggacattagtgagaacaaaattgtgatccttctggattatatgttccaggacttgtac
aacctcaagtctttggaggttggggacaatgaccttgtctatatttcccaccgggctttc
agtgggctcaacagcttagaacatctgaccttggagaaatgcaacttgacctccatccct
acggaagccctctctcacttgcatggcttaattgtgctacagctgcgccacctgaacatc
aacgccatcagggattactcttttaagaggctgtatcgactcaagatcctggagatttca
cactggccctatctagacaccatgacatccaactgcctgtacggactcaacctgacatct
ctgtccatcacccactgcaacctgacatccataccttacgtctccttgaggcacctggtc
tatctcaggtttctgaacctgtcctacaaccccattaccagcatcgaaggctccatgctt
cacgacctactcaggcttcaggagatacaactggtcgggggtcaactcttggtggtggaa
ccatacgctttccggggcctgaactacttgcggatcttgaatgtttcagggaatctcctg
aacacactggaagaatcagccttccactctgtggggaatctggaaacccttatcatagat
aacaatcctttggcctgcgactgccgacttctctggatcttccgacgtcgctggaggctg
aacttcaacaagcgtcaacccacctgtgcgactcccgaatttgtccaggggaaacagttc
aaggatttttcagaggcgcttctgccaaattacttcatttgtcgccggtcgaggatacgg
gaccgcaaaccccagcagatctttgtggacgagggccacaccgtgcagttcatctgccgt
gcagatggagacccacctccggtcatcatgtggctgtcgccaaggaagcacctcatctcg
accaaaaccaacgggcggctcaccgtcttccccgatggcactctggaggtgcgctacgcc
cagattcaggataacggcacctacctatgcatcgccagcaacgcgggaggcaatgacacc
atgctggcgcacctgcacgtccgcagttattcccccgactggccccaccaacccaataag
accttcgctttcatctccaaccagccgaatgagagtgatgccaacagcacgcgtgccacc
gtgcctttccccttcgacatcaagaccctcatcattgccaccaccatgggcttcatctcc
ttcttgggagtcgtgctcttctgcctggtgcttctcttcctttggagcagaggcaaaggg
aacaccaagcacaatattgaaatcgagtacgtcccacggaaatccgatgcgggcatcagt
tccgctgctgacccgccgcgcaagttcaacatgaaaatgatctga
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