KEGG   Thamnophis sirtalis (common garter snake): 106546730
Entry
106546730         CDS       T06107                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tsr01009]
    106546730 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106546730 (TRIM42)
Protein phosphatases and associated proteins [BR:tsr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106546730 (TRIM42)
Ubiquitin system [BR:tsr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    106546730 (TRIM42)
SSDB
Motif
Pfam: zf-B_box ANCHR-like_BBOX
Other DBs
NCBI-GeneID: 106546730
NCBI-ProteinID: XP_013919152
UniProt: A0A6I9XY81
LinkDB
Position
Unknown
AA seq 612 aa
MASKCLNINKKKKRRGNTVSTCLSLCWRFMFTDERNCDCCYCPHEDDTTCQCCHCAFSES
PNCRWCCCSCANNRNCKCLCCTEENNECQCYESRCCTFPYLPYRRGAKLRKRLRSRGASD
TSIITLDKEPSGHAFIDQLVCPLCQRMFLRPFMLPCNHCICDKCIMQSRLNAEITESFYI
ITCPICNKAHCLPFSKKMYLRINYLRARLARKYMRRYGFLRWRFDKSYIPIYCQICDERK
ADKRCLTCQLNYCNFCLRNYHQDISSLNHAYVKISDDIWEDKNCLIHGEIPLSKYCLEDH
ELLCEYCAEAQHNDHNKVSLSVGCTKMSAMLFTTIAKFKKVRYVIDNDLMEVLVLKNNFK
SYKDTKRKEIRNGFMRLRMIIQEREKELMEAVENLELQKQKALYEFATHATRKIDQMDSL
MQYSKEALKEQSPIAFLQSAWSLVKEVEDIIASLYQPNPYLKEDPIKHLKVNFEELAENL
VSIFPSIRSKLRYEQMSKSPYPCGSDVMIPRSVSSAHISNPLGLNRSYSLSSFHSLTEQT
FMNNELRIRPRSSPPTEMKGNQLYSIWNASSDTSGDIRNYPSYNPDAEDESSSPPGLVVI
YQTLVYPTIAKV
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggcttctaagtgtctcaacataaataagaaaaagaaaagaagaggaaatacagtatct
acatgtttgagcctatgctggaggtttatgtttacggatgaacggaactgtgattgttgc
tactgcccacatgaggatgacaccacctgccagtgctgtcattgtgcgttctcagaaagc
cccaattgtcgctggtgctgctgctcctgtgctaataatagaaactgcaagtgtttgtgc
tgtacagaagagaataatgaatgtcagtgctatgaaagtaggtgttgcacttttccatat
ttgccatacagacgtggagctaaattacgaaaaagactcagaagccgaggggcaagtgat
acatctatcattacattggacaaagaaccttctggacatgcttttattgaccagcttgta
tgcccattgtgccaacgaatgtttctccgcccatttatgttgccttgtaatcactgcatt
tgtgataaatgtatcatgcagagcagactaaatgctgaaattacagagagtttctacatc
atcacatgtccaatctgcaacaaagcacattgcctaccattttctaagaaaatgtatctg
aggatcaattatttaagggcgagattggctagaaagtatatgcgccgatatggtttccta
agatggaggtttgacaaaagctatatcccaatctattgccagatttgcgatgagcgcaag
gcggacaagagatgtttgacatgtcaactgaactattgcaatttttgcctgagaaattat
caccaagatatttcttccttaaatcatgcctatgttaaaattagtgatgacatatgggaa
gacaaaaactgcttaatccatggtgaaataccgctttcgaaatactgtcttgaagatcat
gaactactatgtgaatattgtgctgaagctcaacataacgatcataacaaagtttcttta
tcagtaggatgtacaaaaatgtctgctatgttatttacaactattgcaaagtttaaaaaa
gtccgttatgtaatcgataatgacctgatggaagtccttgtattaaaaaacaattttaaa
tcttacaaagacaccaaaaggaaagagattaggaatggttttatgagattacggatgata
attcaagagcgtgaaaaagaactgatggaggcagtagaaaaccttgaacttcagaaacaa
aaggccctttatgaatttgcaacccatgcaacaaggaaaattgatcaaatggacagcctc
atgcaatattctaaggaagctttaaaagaacagagccctattgcattcctgcaatctgct
tggagcttagtaaaggaagtagaagatattattgcaagtctttatcagcccaacccatac
cttaaggaagatccaataaagcatcttaaagtcaactttgaggagcttgctgaaaaccta
gtaagcattttcccatcaatccgcagtaaattacgatatgaacaaatgagcaaaagtcct
tatccctgcggttctgatgtcatgattccaaggagtgtttcaagtgcacacatttcaaat
ccactaggactgaacagaagttactccttatcatcatttcattcactaactgagcaaacc
tttatgaacaatgaactgcgtattagaccaaggtcatcaccaccaacagagatgaaaggg
aatcaattgtattctatttggaatgcctcatcagatacttcaggagatataagaaactat
cccagttacaatccagatgcagaggacgaatcttcttcacctcctggtcttgttgttatt
taccaaactcttgtctacccaactattgctaaggtatga

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