Thamnophis sirtalis (common garter snake): 106546740
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Entry
106546740 CDS
T06107
Symbol
UTP18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106546740 (UTP18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106546740 (UTP18)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106546740 (UTP18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Vps41
PD40
Beta-prop_HPS5
KNTC1_N
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Nbas_N
WDR90_beta-prop_4th
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
106546740
NCBI-ProteinID:
XP_013919163
UniProt:
A0A6I9Y4R6
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MEAKVGVRSGRMPTRKRPRVGEDRLEATVASEEDARRAHHLALLAEKPASEHGLEELVFG
GLEEDEGLLRRFQTLCAQGGDVLNSNFEEESGDSEVENDAEDNFLPLKKPAWVDEDDETE
EIIDMMHRHRKNMMKSDAENKLSKTKLQRRFQEEFQGAMGTTPSWALRGMGKKTKRKTSH
EGDTEDEEEEDLLHKTGNFVIMSDSLPKGILQMKNCLHANNERVSDAKLTTVQFHPTAQV
VMTAGHDRSISLFQVDGITNPQIQSIHLEDFPIYKARFSAEGEQVIATSIHNKLFYIYDM
MEGKIIPINHIRGLEEKIVKKFEVSPDGTFLLLTGTSGYLHLITMKTKEFVGSMKINGRA
IASSFSPDGSRIYTYSDEGEVFIWDVKSRRCVNKFTDEGCLHGTSIAISKNSQYIACGSN
SGVVNVYAHDDCIRETFPKPLKAIMNLVTPATSLVFNPTTEILAMASNRMDDALKLVHIP
SFTVFSNFPVFRRKLLYLAYCMDFSPRSGYFSIANNKGKALLYRLKHYSDF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaaagttggtgttcgttccggcaggatgccgactcgaaaaagacctcgggtg
ggagaggatcggcttgaagcgacggttgcttctgaagaggacgcccgccgagctcaccac
ttggctctcctggcggaaaagccggcctcggagcatggcctggaggagctggtcttcggc
gggctggaggaagacgagggtctgctgcggcggtttcaaaccttgtgcgcccagggtggt
gatgtgttgaacagtaactttgaagaagaatctggcgattctgaagtggagaatgatgca
gaagacaactttcttccactgaaaaagccagcatgggtagatgaagatgacgaaactgaa
gaaataattgacatgatgcaccggcatcggaaaaatatgatgaaaagtgatgcagaaaat
aagctttcaaaaacaaaacttcagagaagatttcaagaagaatttcaaggtgctatggga
acaacaccttcttgggcactgagaggcatggggaaaaaaaccaaaaggaaaacctcacat
gaaggtgacactgaggatgaagaggaggaggatctgttgcacaagacaggcaattttgtg
atcatgtcagactctttaccaaaaggcattttacagatgaaaaattgtttgcacgccaat
aatgaacgtgtatcagatgccaaattaacaactgttcagtttcatcctactgctcaagtt
gttatgacagctgggcatgatcgatctatatcactattccaggtggatggtatcacaaat
ccacagatacagagcattcacttggaagactttccaatttacaaggcacgtttcagtgca
gaaggagaacaggttatagctactagcattcataacaagctattttatatatacgacatg
atggaaggaaaaattattcctataaatcatatcagaggcttagaggagaagatcgtcaaa
aaatttgaagtatctccagatggaacattcctgctgcttactggaacatcaggttatctt
catttgattacaatgaagacaaaagaatttgttggaagcatgaaaataaatggaagggct
attgcatcatcattctctccagatggcagcagaatctacacatattctgatgagggtgaa
gttttcatatgggatgtgaaaagcaggcggtgtgtgaacaagtttactgatgaaggttgt
ctgcatggtacttctattgcaatctctaaaaacagccaatatattgcatgtggttctaat
tctggagttgtgaacgtgtatgcccatgatgattgtatcagagaaacatttcctaagcct
cttaaggctataatgaacttagtcacacctgctacatcgttagtattcaacccaaccact
gaaatactagcaatggcttctaatagaatggatgatgcattgaaactggtccatattcct
tcatttacagtattctcaaattttcctgtgttcaggagaaagttgttatatttagcttac
tgtatggatttctcaccaagaagtggatatttttccatagcaaacaacaaaggcaaagct
ttattgtataggttgaaacactactctgatttctaa
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