Thamnophis sirtalis (common garter snake): 106546892
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Entry
106546892 CDS
T06107
Symbol
VPRBP
Name
(RefSeq) protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tsr01001
]
106546892 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106546892 (VPRBP)
Enzymes [BR:
tsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106546892 (VPRBP)
Protein kinases [BR:
tsr01001
]
Serine/threonine kinases: Other
Other
106546892 (VPRBP)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106546892 (VPRBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
106546892
NCBI-ProteinID:
XP_013919358
UniProt:
A0A6I9XZL1
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MTSCCELVDSKAELTALLEQWEKDHGSGQDMVPILTRMSELIEKETEEYRKRDPDPFDDR
HPGRADPKCMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTFATGLLGGAMENQDIAANYRDENSLLVAFVLQRLR
ELQVIETNTKHENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVTGDMDISFNL
DSNHKTSSRVNSAAKKSGKQHEKENFRKAKQKLGFSSEPERMFVELSNSSWSEMSPWVIG
TNYNLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRDLMMFYIDLKRTNDVLLTFE
ALKYLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMH
PHVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLD
ILNLQTQGALLSDDEIFASRQTGKHTCMAMRRYFEAHLAIKVEQVKQSLQRTEGGILVHP
QPPYKACSYTHEQIVEMMEFLIEYGPGQLYWDPAEVFLKLCCVQLMLQLISIACNWKTYY
ARNDTVRYALDVLAILTVVPKIQLQLAEAVDTVDEGGTSISIVGISIILGLAEGEFFIHD
AEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRALPQTPRNSEHTLAKMWNVVQSNNG
IKVLLSLLSVKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPV
LQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLI
RNHLISKGLGETATILTKEADLPMTAASHSSAFTPVPATSSPVSLPRTPRIANGIAARLT
NHPSVASGASSVHPQPRPAGCQGPLALPGPSHATNAPVIGRISFIRERPSPCNGRKIRVL
RQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPH
QCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESG
FTCCAFSARERFLMLGTCTGHLKLYNVFSGQEEASYKCHNSAITHLEPSRDGSLLLTSAS
WSQPLSALWGMKSVFETKHSFTDDHYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLF
NPDLANNYKKNSATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVIV
NTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDLLEERMRSPFGSSFR
TFNATDYKPIGKDYNCSY
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatgttgtgagcttgtagattccaaggctgagctcactgctttgctagagcaa
tgggagaaagatcatggcagtggacaagacatggttcccattcttacccgaatgtcagaa
ttgattgaaaaggaaacagaagagtatcgcaaacgagatccagatccatttgatgatagg
catcccggtcgagcagacccaaaatgtatgcttggacacttgctgaggattcttttcaag
aatgatgatttcatgaatgcactggtaaatgcttatgtcatgacaagcagagaacctcca
ctgaacacagctgcctgccgactcctgttggacattatgcctgggctggaaactgctgtt
gtctttcaggagaaggaaggcattgttgagaatctcttcaaatgggcacgagaagctgat
cagcctttaaggacattcgcaactggattgcttggaggtgccatggagaatcaagatatt
gctgccaactatagagatgaaaattccctattggtggcatttgtccttcaacgtttgcga
gaactgcaagtcattgaaaccaacacaaagcatgaaaataagcgtcctagtcctcgaaaa
gtgccatccgaccccttgctgcctctagatgaagaagctgtggacatggattatggggag
atggctgtggatggtgagcaggaggaagtgacgggggacatggatatttcatttaacctt
gactcaaatcacaagacaagtagtcgggtaaattctgctgcaaaaaaatcagggaagcaa
cacgaaaaagagaatttccgaaaagcaaaacaaaaactcggcttctcttctgaaccagaa
aggatgtttgttgaactgtctaatagcagctggtctgagatgtctccttgggtgattggc
acaaattataacctgtatcccttgacccccgccatagagcaaagactgattctgcagtat
ctgactcctctaggggagtatcaagagttgctgcctatcttcatgcaacttggatcaaga
gatttgatgatgttctatattgatttgaaacggaccaatgatgtactgcttacttttgaa
gccctaaagtatttggcatctctgctgctccacaacaagtttgcaacggagtttgttgct
cacggaggagtacagaagctactggagattcctcgcccttctatggcagccacaggtgtc
tccatgtgtttatactatttgtcttacaatcaggatgccatggaaagggtatgcatgcat
ccccacgtgctatcagatgttgtgaactacaccttgtggttgatggaatgctctcacgca
tcaggctgctgccatgctaccatgttcttttctatttgtttctcgttccgtgcagtttta
gagctgtttgataggcatgatggcttacggcgcctagttaacttgattagcactcttgat
atcttaaatttgcaaacccaaggtgcgctgctaagtgacgatgagatctttgctagccgt
cagactggaaaacatacttgcatggccatgcgcaggtattttgaagcacatcttgccatc
aaagtagagcaagtgaagcagtcacttcaacgcacggaaggtggaattctggtccatcca
cagcctccatataaggcttgttcctatactcatgagcagattgtggaaatgatggagttt
ttaatagaatatggaccaggtcagctctattgggatccagcagaggtgtttctcaagcta
tgttgtgtacagctcatgcttcagcttatttcaatagcatgcaattggaagacttactat
gcaagaaacgacacggtgcgttacgcgttggatgttttggccatcctcactgtggttcca
aaaattcagttacagttagctgaggcagtggataccgtggatgagggaggaacatctatt
tctattgtgggtatcagcatcattttggggcttgccgagggtgaattctttattcacgat
gcagaaatccagaaatctgcccttcagatcatcattaactgtgtctgcggtccagacaat
cgcatctccagcattggcaaatttatctctggcacacctcgtcgtgcactcccccaaaca
cccaggaatagtgagcatactttggccaagatgtggaacgtggtgcagtcaaacaatggc
atcaaagtgctgttatccttgctctctgtcaaaatgcccattacagatgcagaccagatc
cgagcattggcctgcaaagctctggttgggttgtcgcgaagtagtacagtccggcagatc
atcagcaagctgcccctgttcagcagctgtcagatccagcagctaatgaaggagcctgtg
ctgcaggataagcgcagcgagcatgtcaagttttgcaaatacgctgcggagctgatagag
cgtgtctcaggaaaacccttgttgattgggaccgatgtctctctggcccgactacagaag
gcagatgtggtggcccagtcgaggatttcatttcctgagaaggagctgctccttttgatc
aggaaccatctcatctctaaagggctaggagaaactgctaccattcttacaaaggaggca
gatctacccatgacagcagcttctcattcctctgccttcaccccagttcctgccacttca
tctcctgtgtctctgcctcgtacccctcgcatagcaaatggcattgcggcccggttgact
aaccatccttctgttgcttctggtgcttcctctgttcaccctcagccaagaccagctggc
tgccagggcccacttgcactgccaggcccatctcatgccaccaacgccccagtgattggc
agaattagctttatccgtgagagaccatctccctgcaatggcagaaaaatcagagtgctt
cggcaaaaatcagaccacggcgcctacagtcagagcccagctatcaaaaaacagctggac
agacaccttccttcccctcccaccttggacagtataatcacagagtaccttagggagcag
catgcgcgctgcaaaaaccctgtagctacttgtccccccttttctctttttacaccccac
cagtgtcctgagccaaaacagaggcgccaagcgccaactaactttacctcgcggctgacc
cgcagggcagccttcccaaagtatggcggggtagatggtggatgctttgatagacacctt
atatttagcaggttccgcccaatttctgtgttccgggaagcaaatgaagatgaaagtggc
tttacgtgttgtgcattttctgcacgggagcgattcctgatgttgggcacctgcacaggg
cacctaaaactctacaatgtctttagcgggcaggaggaggccagctacaagtgccataac
tctgctatcacgcatcttgaaccatccagggatggttctttattgctgacatctgcttcc
tggagccagccactttctgcattgtggggaatgaaatctgtctttgaaaccaagcattcc
ttcacggatgaccattatgttgagttcagtaagcattctcaagatagggtcattggcacc
aagggggacattgcccatatctatgatattcagactggcaacaagctcttgactttgttt
aacccagatcttgcaaacaactacaagaagaattctgccacctttaaccccacagatgac
cttgtcttaaacgatggtgtcctctgggatgttcgctctgcacaggctattcataaattt
gataaattcaatatgaccatcagtggcgttttccacccgaatggattggaggtcatagtg
aacacagaaatttgggacttgcggactttccacttgttacacacagtgcctgctttggat
caatgccgtgttgttttcaaccatactgggacagttatgtatggagctatgctacaagcc
gatgatgaagatgatttgctggaagagagaatgcgaagtccttttggatcatccttcagg
acattcaatgcaacagattacaaaccaattggtaaagattataattgttcctattga
DBGET
integrated database retrieval system
