Thamnophis sirtalis (common garter snake): 106546945
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Entry
106546945 CDS
T06107
Symbol
PPFIA2
Name
(RefSeq) liprin-alpha-2 isoform X1
KO
K26226
liprin-alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106546945 (PPFIA2)
Membrane trafficking [BR:
tsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106546945 (PPFIA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
DUF3450
Motif
Other DBs
NCBI-GeneID:
106546945
NCBI-ProteinID:
XP_013919415
UniProt:
A0A6I9Y9X1
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MMCEVMPTINEDTPMSQRGSQSSGSDSDSHFEQLMVNMLDERDRLLDTLRETQESLSLAQ
QRLQDVIYDRDSLQRQLNSALPQMTVAAGTSIENNIQRTISCPNEFAALTKELNACREQL
LEKEEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKAL
KSLFEHHKALDEKVRERLRVSLERVSTLEEELTAANQEIIALREQNAHIQRKITSGEGPP
DTEHIKGMEPGQKIHEKRLSNGSIDSNDETAQLVELQELLEKQNYEMAQMKDRLAALSSR
VGEVEQDAETARKDLIKTEELNSKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI
HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRI
AALTKSDPTSSTSSDDYQYVMEAKLQEMISIRRKAEERHGNIEERMRHLEGQLEEKNQEL
QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQESENFRKNL
EESLHDKERLAEEIDKLRVELDQLKIRAGSLIEPTLSRTHLDSSAELRYSVGSLVDSQPD
YRSTKVIRRPRRGRMGIRRDEPKVKSLGDHEWNRSQPVGVLSSHHFESDTEMSDIDDDDR
DTLFSSMDLLSPSGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRAEEIENRVGSV
SLEGLNLARVHPGTSITGSITASSLASSSPPSGHSTPKLTPRSPAREMDRMGIMTLPSDL
RKHRRKIAVEEDGHEDKATIKCETSPPPTPRAIRMTHTLPSSYHNDARSSLIASLEPESI
GFGSVNSSQDSLHKAPKKKGIKSSIGRLFGKKEKARLGQLRGYIETEAAAQESLGLSKLG
TQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGA
IMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPPTSRTPSGNVWVTHEEMEN
LAAPTKTKDNEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLT
KKDLRVHLKMVDSFHRTSLQYGIMCLKKLNYDRQELERRREASQHEIKDVLVWSNDRVIR
WIQAIGLRDYANNVLESGVHGSLIALDDNFDYSSLALLLQIPTQNTQARQILEREYNNLL
ALGTGRRLDESDDKNFRQGSSWRRQFPPREVHGISMMPGSSETLPAGFRLTTTSGQSRKM
ATDVASSRLQRLDSSTVRTYSC
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgcctacgataaacgaggacaccccaatgagtcaaagggggtcc
cagagcagcggatcggactccgattctcactttgaacagctaatggtgaatatgctggat
gaaagagatcgtcttctagacactcttcgggagacccaagaaagtttatctctggcacag
caacgacttcaagatgtaatttacgacagagattctctgcaacgacaactgaattctgca
ctgccccagatgacggttgcggctggtacgagcattgagaataacattcaaaggaccata
tcctgccctaatgaatttgctgcacttacaaaagaactaaatgcatgtagggaacaacta
ctggaaaaagaagaagaaatttcagaattgaaagctgaaaggaataatacaagactgtta
ctggaacatttggagtgccttgtttcaagacatgaaaggtcactaagaatgacagtggtg
aaacgccaagcacagtctccctcgggagtttccagtgaagttgaagttctgaaagcattg
aaatctttgtttgagcatcataaggctttagatgaaaaggtaagagaacgactaagggtt
tccttagaaagggtctccacgcttgaagaggaactaacagctgctaatcaggagattata
gctttacgtgaacaaaatgcacacattcaaagaaaaattacatcaggagagggtccacct
gatacagagcatatcaaaggaatggagcctggacaaaaaattcatgaaaagcgtctatca
aatggctctatagactcaaatgatgaaactgctcagttggtagaactgcaagaacttctc
gaaaagcaaaattatgaaatggcacagatgaaggatcgcttggctgccctgtcttccaga
gttggagaggtggagcaagatgcagagactgctaggaaggacctcattaaaactgaagaa
ctgaacagcaaatatcagagagatattagagaggctatggcccagaaggaagatatggaa
gaaagaataactaccctggagaaacgttacctaagtgcacagagggaatctacttccata
catgacatgaatgacaaactggaaaatgaacttgcaaacaaggaagccatcttgcgtcag
atggaggaaaaaaacaggcagctgcaagaacgtctcgagctagctgagcaaaaactacaa
caaacaatgagaaaagctgagactttgccagaagtggaggcagaattggcccagagaatt
gcggcactgactaagtctgatccaacctcttctacctcatctgatgattatcaatatgtt
atggaagctaaactacaagaaatgatctccatacgtaggaaggcagaagaaagacatggc
aatattgaagaacgcatgcggcacctagagggtcagttggaagagaagaatcaagaactt
caaagggcaagacaaagagaaaaaatgaatgaagagcacaacaaaagattgtctgatact
gtggacagacttttgacagaatctaatgaacgtttgcaactacatttgaaagagagaatg
gcagcattggaagagaagaatgttttaatacaagaatcagagaacttcaggaagaatttg
gaggaatctttacatgataaggaaagattagcagaagagatagacaaactgagagttgaa
cttgaccagttgaaaatacgagcaggttctttaattgagcccacattgtcaaggacacat
cttgattcatcagcagaattgaggtactctgtgggctcacttgttgatagtcaaccagat
tataggtctactaaagtgataagaagacctagaagaggtcgtatgggaatccgaagagat
gaaccaaaggtaaaatcccttggagatcatgagtggaatagaagtcagccagttggagtt
ctaagcagccatcattttgagagtgacactgaaatgtctgatatagatgatgatgataga
gatacactttttagttcaatggatcttttgtcaccaagtggacattcagatgctcagacc
cttgctatgatgcttcaggaacaactagatgcaatcaataaagaaatcaggttaatccag
gaagaaaaagaatctacagaacttcgtgctgaagaaatagaaaacagagttggtagtgtg
agtctagaaggcttaaatctggccagggttcatcctggaacatcaattactggctcaata
actgcatcttcattagcaagctcctctcctcccagtggccactcaactcctaaactcact
ccacgcagcccagctagagagatggatcggatgggtatcatgacactgccaagtgatctc
aggaaacatcgaagaaagattgcagttgaagaagatggacatgaagacaaggccacaata
aaatgtgaaacatctcctccacctacacctagggccataagaatgactcacactctacct
tcttcataccacaatgatgccagaagtagtttgattgcatccttggaaccagaaagtatt
ggttttggcagtgtcaatagcagccaggattccttgcacaaagctcccaagaagaaagga
ataaagtcttcaattggacgcttgtttggtaaaaaagagaaggcacgacttggacagcta
agaggctatatagaaactgaagctgcagcacaagaatctctgggcttaagcaaacttgga
acccaggcagaaaaagacagaagattaaagaaaaagcatgaacttctagaggaagctcgg
aggaaggggttaccttttgcacaatgggatgggccaacagtagttgcctggctagagctt
tggctaggaatgcctgcatggtatgttgctgcttgccgcgcaaatgtgaagagtggtgcc
atcatgtctgcactgtcagatacggaaatccagagagaaattggaatcagcaatcctctc
catcgcctgaagctccgtctggcaatccaggagatggtgtccctcacaagcccatcagcc
cctccaacttctagaacgccctcaggcaatgtctgggtaacccatgaagaaatggaaaat
cttgcagctccaaccaaaacgaaggacaatgaggaaggcagctgggctcagaccctagct
tatggtgatatgaaccatgaatggattggtaatgaatggcttcccagtctagggttacca
cagtaccgaagttacttcatggaatgtttggtggatgcaaggatgttagatcatctaaca
aaaaaagatctccgtgtacatttaaaaatggtggatagctttcatcgaacaagtctgcaa
tatggaatcatgtgtttaaagaaactgaattatgatagacaagaattagaaaggagaagg
gaagcaagtcagcatgaaataaaagatgtgttggtgtggagcaatgacagagttatacgc
tggatacaagcaattggattacgagattatgcgaataatgtgctagaaagtggtgtgcat
gggtcactcatagccttagatgataactttgattatagcagtttagccttattgttgcag
attccaacacagaatacccaggcacggcagattcttgagagggaatacaacaatttattg
gcgctaggaacaggtagacgccttgatgaaagcgatgacaagaattttaggcaaggctct
tcctggcgaagacagtttcctccacgtgaagttcatggaatcagcatgatgcctggctct
tcagaaacactgccagctgggtttaggttaactacaacatcaggacagtcacgaaaaatg
gcaactgatgttgcttcatctcggttacagaggttagacagttctacagttcgcacatat
tcatgttga
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integrated database retrieval system
