Thamnophis sirtalis (common garter snake): 106546978
Help
Entry
106546978 CDS
T06107
Symbol
LRRN1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106546978 (LRRN1)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106546978 (LRRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_9
ig
LRR_EndoS
LRR_1
V-set
fn3
Ig_2
Pur_ac_phosph_N
LRRCT
LRRNT
LRR_LRWD1
Sp38
Peptidase_M73
Ig_5
LRR_NXF1-5
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
106546978
NCBI-ProteinID:
XP_013919467
UniProt:
A0A6I9XYV8
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MAHISFALKICQLALGLLINSFQATSIQNNECPQLCVCEIRPWFTPQSTYREAPTVDCND
LRLTKIPSNLFTDTQVLLLQSNNIAKTTDELQQLFNLTELDFSQNNFTSIKDVGLSNLSQ
LTTLHLEENQITEMTDYCLQDLCNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLK
VIAGRWFDSTPNLEILMIGENPVIGILDMNFKSLSNLRSLVLAGMYLTDIPGNALVGLDS
LESLSFYDNRLAKVPQLALEKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGEL
VSIDRYALDNLPELTKLEATNNPKLSYIHRLAFRNVPALESLMLNNNALNAVYQKTVESL
PNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYKGQQVKEVLVQDSSE
QCLPMISHDTFPNHLNLDIGMTVFLDCRAMAEPEPEIYWVTPLGNKITVETLSDKFKISS
EGTLEISNIQMEDSGRYTCVAQNIEGADTRVATIRVNGTLLDGTQVLKIYVKQAESHSIL
VSWKANSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPSTDYEVCLTVSN
IHQQTQKSCVNVTTKNAAFALDITDQETSTALAVVMGSMFAVISLASVSVYVAKRFKRKN
YHHSLKKYMQKTSSIPLNELYPPLINLWEGDCEKEKEGSAETKPTQVDTSRSYYMW
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctcatattagttttgcattaaagatttgccagctggcactgggattgctcataaat
tcatttcaagcaacttccatacaaaataatgaatgtccacaattgtgtgtctgtgaaata
agaccctggtttactcctcagtcaacctacagagaagctccaacagttgactgcaatgat
cttcgtttaacaaaaatccccagtaaccttttcactgatactcaagtccttctcttacaa
agcaacaatattgccaagaccacagatgaactccagcaacttttcaatttaacagagttg
gatttttcacaaaataattttactagcataaaagatgtgggattatcaaatctttctcag
ttaaccactttacacttggaggaaaatcagatcacagagatgacagattattgcctacaa
gatctgtgcaatctacaggaactttatatcaaccataatcaaatcagtacaatttccgca
aatgcattctcaggcttgaagaatcttctaaggcttcatcttaattccaataaattaaaa
gttattgctggtcgttggtttgattctacacctaacttggaaattttgatgattggagaa
aatcctgtgattggaatactagatatgaacttcaaatcactatcaaatttaagaagtcta
gttctggctggaatgtatctgactgacatccctggaaatgctctagtgggcttggatagt
cttgaaagtctctcattttatgataacagattggctaaagttcctcagcttgcacttgag
aaagtcccaaatttaaaatttttagatcttaacaaaaacccaatccacaaaattcaagaa
ggagatttcaaaaacatgcttcggttgaaagaacttgggatcaacaacatgggagagctg
gtgtctattgataggtatgcactagacaatcttcctgaacttacaaagcttgaagccacc
aataatccaaagttatcttacatacatcgtttagcatttcggaatgtacctgctctggaa
agcttgatgcttaataataatgccttgaatgcggtctaccaaaaaacagtggaatccctt
ccaaatttacgggagattagtattcacagtaatccactcagatgcgactgtgtcattcac
tggatcaactcaaacaagaccaatattcgtttcatggaacccttatcaatgttttgtgct
atgccaccagaatataaaggacaacaagtaaaggaggtattagtacaggattccagtgaa
cagtgtcttccaatgatttcacacgatactttcccaaaccatttgaatttggacattggc
atgactgtctttttggattgtcgggctatggcagaacctgagcctgagatttattgggtt
actccacttgggaataaaataactgtggaaactctttcagacaaatttaagattagtagt
gaaggcacactggaaatatcaaatatccagatggaggattcaggaagatacacatgtgta
gctcaaaatatagaaggtgcagatacaagagtggctactataagagtgaatggaacactt
cttgatggtactcaggtgctgaaaatttatgtcaagcaagcagagtctcattccatcctg
gtttcttggaaagctaattctaatgttatgacatctaatttaaaatggtcatctgcaaca
atgaagattgataacccacacattacatacactgcaagggtcccagttgatgtacatgaa
tacaatcttacccatttgcaaccctccacagattatgaagtctgtctcacagtatctaat
atccatcagcaaactcaaaagtcttgtgtaaatgttactacaaaaaacgcagcatttgcc
cttgatattactgaccaagagacaagcacagccctagctgtagtcatgggatcgatgttt
gctgttattagtcttgcctctgtttctgtctacgttgcaaaaaggtttaaaaggaaaaac
tatcatcattcattgaaaaaatatatgcaaaagacctcttctattcctttgaatgaactc
tatcctccacttattaatctctgggaaggtgactgcgaaaaagaaaaggaaggttcagca
gaaaccaagccaactcaagtggacacatccagaagctattatatgtggtaa
DBGET
integrated database retrieval system
