Thamnophis sirtalis (common garter snake): 106547062
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Entry
106547062 CDS
T06107
Symbol
RARS
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106547062 (RARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsr01007
]
106547062 (RARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsr03016
]
106547062 (RARS)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106547062 (RARS)
Enzymes [BR:
tsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
106547062 (RARS)
Amino acid related enzymes [BR:
tsr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
106547062 (RARS)
Transfer RNA biogenesis [BR:
tsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106547062 (RARS)
Prokaryotic type
Other AARSs
106547062 (RARS)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
106547062 (RARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1
CCDC14
LisH_TPL
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
106547062
NCBI-ProteinID:
XP_013919571
UniProt:
A0A6I9Y002
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAMQAAEWVERLQRQEREIKVLTAEIDHLKNYGCLGASPTLEELREENAKLKYRLNILQK
SLQEEKRREKFKGMININHRIQEIFKAAIKAAYPDLENPPLAVTPSQQSRFGDYQCNSAM
SISQMLLKTKEQKVSPRDIADKIARNIPDNECIEKIEIAGPGFINVHLKKDFVSRQLSSV
LMNGVQPPAAGERKKVVIDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFMGHDVLRLNHL
GDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKHAYHCVVLLQ
SKSPDIIKAWNLICDVSRKEFQKIYDCLDVSIIDRGESYYQDRMHEIVKELDERGFLQMD
DGRKIVFIPGCSVPLTIVKSDGGFTYDTSDLAAIKQRIFEEKADYIIYVVDSGQSVHLQT
VFAAAQMIGWYDPKVTKVIHAPFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLK
EKERDKVLTAEELKAAQISVAFGCIKYADLSHHRINDYIFSFDKMLDDRGNTAAYLLYAF
TRIRSIARVANINEDKLQKAAGTTEIILDHEKEWKLGKCILRFPEIIQKCLDDLLLHTLC
DYLYELATTFTEFYDNCYCVEKDRQTGEIVNVNMWRMLLCEATAAVMAKGFDILGIKPVQ
KM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaagcggcggagtgggtagagcggctgcagcgccaggaaagagaaataaag
gttttgactgctgaaatagatcatttgaaaaactacggatgcttgggagcttcaccaacc
ttggaagaattgcgggaagaaaatgcaaaattaaaatatcgcttaaatatcctgcaaaag
agccttcaggaggaaaaacgtagagaaaaattcaaaggcatgattaatatcaatcacagg
attcaggaaatttttaaggcagctatcaaagctgcgtatcctgatttagaaaacccacca
ttggcagtaacaccaagtcaacagtccaggtttggtgattaccagtgcaacagtgctatg
agcatatctcagatgctgctcaagactaaggagcaaaaagtaagcccaagagatattgct
gacaagattgccagaaatattccagacaatgaatgcattgagaaaattgaaatcgctgga
cctggtttcatcaatgtacacttgaagaaagattttgtatccagacagctgagcagtgta
ctaatgaatggagttcaaccacctgctgctggtgaaagaaaaaaggtggtgattgatttc
tcttccccaaatattgcaaaagagatgcacgttggacatctgagatcaactataattggg
gacagtatgtgtcgtcttttcgaattcatgggccatgatgttctaagattgaatcattta
ggagattggggcacccagtttgggatgcttattgctcatctgcaagataaatttccagat
tacctcactgtttctccacccataggagatctccaagctttttataaggaatcaaaaaga
aggtttgacactgaggaagagtttaagaagcatgcatatcactgtgtggtcctattgcag
agcaaaagtccagacatcattaaagcttggaatctcatttgtgatgtatcccgaaaagaa
ttccaaaagatctatgactgcttggatgtttccatcatagacagaggagaatcatactac
caagataggatgcatgaaattgtgaaggagcttgacgaacgagggtttctacaaatggat
gatggccggaagattgtatttattccaggatgttctgttcctttgacaattgtgaagtct
gatgggggtttcacatatgatacatcagacttggcagcaataaagcagaggatttttgaa
gaaaaagctgattatataatttatgtggtagacagtgggcagtctgttcacttacaaaca
gtatttgcagcagctcagatgattggctggtacgaccccaaagtgaccaaagtaattcat
gctccttttggagtggtattgggagaagacaaaaaaaagttcaaaacacgttctggggat
acagtacgactgattgatcttcttgaagagggactgaagcgatcaatggataaactaaag
gagaaggaaagagataaggttcttacagctgaagaattaaaggcagcgcagatctcagtt
gcttttggttgcattaaatatgcagacctgtctcatcacagaataaatgattatattttc
tcttttgataagatgcttgatgatagaggaaatactgctgcttatttactttatgccttc
actcgaatcagatctatagcaagagtggctaatatcaatgaggataaactacaaaaggca
gctggaacaacagagataatattggatcatgaaaaagaatggaaactaggcaaatgcatt
ttgaggtttcctgagatcatccaaaagtgcttagatgaccttttactgcacacactctgc
gactatctctatgagctagccaccacatttactgaattctatgataactgttattgtgtg
gaaaaagacagacaaactggtgaaatagtgaatgtgaacatgtggcgaatgctcctgtgt
gaagcaacagctgctgtgatggccaaaggttttgatatcttgggaatcaagcctgtccaa
aaaatgtaa
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