Thamnophis sirtalis (common garter snake): 106547219
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Entry
106547219 CDS
T06107
Symbol
THOC7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106547219 (THOC7)
09122 Translation
03013 Nucleocytoplasmic transport
106547219 (THOC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106547219 (THOC7)
03041 Spliceosome [BR:
tsr03041
]
106547219 (THOC7)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106547219 (THOC7)
Spliceosome [BR:
tsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106547219 (THOC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
UPF0193
OVT1
OSTMP1
DASH_Dad2
COG6_N
Zw10_N
Peptidase_S10
DUF4407
Motif
Other DBs
NCBI-GeneID:
106547219
NCBI-ProteinID:
XP_013919777
UniProt:
A0A6I9XZG8
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCHSGSQEEGYTQYQRMLSTLSQC
EFSMGKTLLVYDMNLREMENYEKIYKDIENSIAAAHEKIAECKKQILQAKRIRKNRQEYD
NLAKIIQQHPDRHETLKQLEALGKELQHLSHIKESVEDKLELRRKQFHVLLSTIHELQQT
LENDEKLSEAEESSDAPMEAEDKQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgtaaccgacgatgaagttattcgtaagagacttttgattgatggagatggt
gcaggggatgacagacgaattaatttgctggtgaagagtttcatcaagtggtgccattct
ggatctcaggaagaaggctatactcagtatcagcgcatgctcagcactctttcacaatgt
gaattttcaatgggaaaaactttactagtatacgacatgaatctcagagaaatggagaac
tatgaaaaaatctacaaagatatagaaaacagcatagctgcagctcatgaaaaaattgcc
gagtgcaaaaagcaaattcttcaagcgaaaaggatacgaaaaaaccgccaagaatatgat
aacttggctaaaataatacagcaacatccagatagacatgaaacattgaagcaattggaa
gctctggggaaagaactgcagcatctgtctcatatcaaagaaagtgttgaggacaaactg
gagttgagacggaagcaatttcacgttcttctgagcaccatccatgagcttcagcaaaca
ctggaaaatgatgagaaactttctgaagctgaagaatcatcagatgctccaatggaagca
gaggataaacaatag
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integrated database retrieval system
