Thamnophis sirtalis (common garter snake): 106547394
Help
Entry
106547394 CDS
T06107
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04080
Neuroactive ligand-receptor interaction
tsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106547394
04082 Neuroactive ligand signaling
106547394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106547394
Ion channels [BR:
tsr04040
]
Ligand-gated channels
GABA-A
106547394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
106547394
NCBI-ProteinID:
XP_013920015
UniProt:
A0A6I9YA91
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MVSAKEPTIAMFSGLSIIFFLCWATCVTALPGQEKLWPENFTRILDRLLDGYDNRLRPGF
GGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDSPIEILRLNNLMVNKV
WTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACP
LKFGSYAYPKSEMIYTWTKGPKNSVEVPEESSSLVQYDLLGHTASTDTIKSITGEYVVMT
VHFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISAR
HSLPKVSYATAMDWFIAICFAFVFSALIEFAAVNYFTNIQTEKAKRKGVKSIPECSAAPV
QKEMCTEETSTCTDSNSNVRKRTNTIVQPDLETAKRIEPGNNSLPSSTLTQGPLDITPRS
PSASSPNPFSRINISETLASARATPSAPPSTPVLTGYLAQQGTMESPSIHHLLGSRLEEI
QTTTNALGVPTKSPCLSSPPAPSAFSSGTSKIDKYARILFPVTFGAFNMVYWVVYLSKDT
MEKTKTLM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaaggagccaacgatcgctatgttttcgggtctgtcgatcatctttttc
ctgtgctgggcgacctgtgtcaccgcgctcccgggacaagagaaattatggccggagaat
tttacgcgcatcctggaccgtctcttggatggctatgacaacaggctgcgtcctggattt
gggggtcctgtcactgaagtcaaaacagatatctatgtcacaagttttggacctgtttct
gatgtagaaatggaatatacaatggatgttttctttcgtcagacatgggttgacaagaga
ttaaaatatgatagtcccattgaaattctaagattaaacaacttgatggttaacaaagtg
tggaccccagatactttctttcggaatggaaaaaaatctgtgtctcataacatgacagcc
ccaaataaactatttagaattatgagaaatggcaccattctatatacaatgaggctcacc
ataagtgctgaatgtcccatgagactggtggatttcccaatggatggacatgcctgtccg
ctaaaatttggaagctatgcatatccaaagagcgaaatgatctacacctggacaaaaggg
ccaaaaaattcagtggaagtccctgaagagtcttctagtttagttcaatatgacctactt
ggacatacagcatctactgacacaattaaatctatcacaggtgaatatgtggtcatgaca
gtacacttccatctccgaaggaaaatgggatattttatgatacagacatatattccgtgc
atcatgactgtgatcctctcccaggtgtcattttggattaataaagagtccgttcctgcg
agaactgtttttggaataaccactgtgttgaccatgacaactttgagcatcagcgccagg
cattccttaccgaaggtctcctatgccacagccatggattggttcatagcgatatgcttt
gcctttgtattctctgcactgattgaatttgcagctgtcaactattttacgaacattcag
acagaaaaagccaaaaggaagggagtgaaatccatccctgaatgttcagcagcacctgta
cagaaggaaatgtgtacagaggagacatccacgtgtacagactcaaattcaaatgtgagg
aaaagaacaaacaccatagtacaaccagatttggagactgccaaaagaattgagccagga
aacaattcattgccttcttctacattaactcaggggcccttggacattacgccccgatcg
ccttcagcttcaagtccaaacccattcagccgaattaatatatcagaaacactggcttct
gcaagagcaactccttcagctcctccatccaccccagttttaacaggttaccttgcccaa
cagggcaccatggaatccccgtccattcatcatttacttggatctagactggaggagatt
cagactaccacaaatgctttgggagtgcccacaaaatccccatgcctcagttctcctcct
gctccatcagccttcagctctggcaccagtaagatagacaaatatgcacgcattttgttt
cctgtcacttttggagcatttaacatggtctactgggtggtttatctttccaaggacacc
atggaaaaaactaagactctaatgtag
DBGET
integrated database retrieval system
