Thamnophis sirtalis (common garter snake): 106547421
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Entry
106547421 CDS
T06107
Symbol
F11R
Name
(RefSeq) junctional adhesion molecule A
KO
K06089
junctional adhesion molecule 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04514
Cell adhesion molecule (CAM) interaction
tsr04517
IgSF CAM signaling
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106547421 (F11R)
04517 IgSF CAM signaling
106547421 (F11R)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106547421 (F11R)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106547421 (F11R)
04090 CD molecules [BR:
tsr04090
]
106547421 (F11R)
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
CTX family
106547421 (F11R)
CD molecules [BR:
tsr04090
]
Proteins
106547421 (F11R)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
I-set
C2-set_2
Ig_6
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
106547421
NCBI-ProteinID:
XP_013920074
UniProt:
A0A6I9XVB3
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MAGCQVLQRNILIFGLLSLGSLVLGELPSVIEVRENQDVSLPCKALTSQPNPKRQEWKFQ
KDGLTLLFYHADKFTANYKDRATFTPYEIQLKSVTRKDSGTYICEVLGDSFGESAVKLIV
QVPATKPTAHVPSVVTIGNKAVLRCEETDANPRPTFKWFKNNVQMPPDPKTSTIFKNSSY
TIDPDTGVLVCSSVTDFKMCLSWGGGGGCKQDAPLPPSTHKQLPL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctgccaagttttacagagaaatatcttgatttttggtctcctctctttaggg
tccctggtcctgggtgaactcccatcggtaatcgaagtccgcgagaatcaagatgtgagc
ctaccttgcaaagctttaacatctcaacccaacccaaaacggcaggagtggaagttccag
aaagatggcctcaccctgctcttctaccacgccgacaagttcacggctaattacaaggat
cgggccaccttcaccccatacgagatccagctcaagtcggtgacacgcaaagattcgggc
acctacatttgcgaagtcctcggagattctttcggggagtcggcagtgaagctgattgtg
caagtgcccgccaccaagcccaccgcccacgttccatcggtggtgaccattggaaacaag
gcggtcctgaggtgtgaggagaccgatgccaacccccggccgactttcaagtggttcaag
aacaatgtccagatgccccccgatcccaaaaccagcaccatcttcaagaattcgtcctac
accatcgacccggacaccggcgtgctggtatgttcctctgttactgactttaagatgtgt
ttatcgtgggggggaggagggggctgcaagcaggatgccccacttccacccagtactcac
aaacaattgccgctctag
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integrated database retrieval system
