Thamnophis sirtalis (common garter snake): 106547439
Help
Entry
106547439 CDS
T06107
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
tsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106547439
03015 mRNA surveillance pathway
106547439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106547439
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106547439
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106547439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106547439
NCBI-ProteinID:
XP_013920090
UniProt:
A0A6I9YAA6
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MATDSWALAVDEQEAAAAASLSSLQLKEDNLKPDANGAVVKTNSNAEKAEEEEKEDRAAQ
SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYALGFNRPSKIQ
ENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPDHRYPQCLCLSPTYELALQTG
KVIEQMGRFYPALKLAYAVRGNKLERGQKIAEQIVIGTPGTVLDWCSKLKFIDPKKIRVF
VLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKR
EEETLDTIKQYYVLCSSREEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAGELSKEGHQ
VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD
NETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILSRIQEHFNKKIHKLDTDDLDEIEKIAN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgactcgtgggcgctggcggtggacgagcaggaggcggccgccgcggcctcg
ctgagcagcttacaactgaaggaggacaacctcaagccagatgccaacggtgccgttgtc
aagacaaacagcaatgctgagaaggcggaggaggaggaaaaagaggaccgggccgcccag
tcgctgctgaacaagctcatccggagcaatttggtggacaacacgaaccaggtggaggtg
ctgcagagggaccccaactcccccctctactcggtcaagtctttcgaagagctgcgcctg
aagccccagctgctccagggggtctacgccttggggttcaacaggccctccaagatccag
gagaatgccctgcctatgatgctggcggagcccccacagaacctgattgcccagtcccag
tccggcaccgggaagacggcagccttcgtcctggccatgctcagccgggtggagccggac
cacagatatccccagtgcctctgcctttcccccacgtacgagttggccctccagaccggg
aaggtcatcgagcagatgggccggttctaccctgcgctgaagctggcctacgctgtccgg
ggcaacaagctggagcgtggccagaagatcgccgaacagatcgtcatcggcacgccgggc
accgtcctggactggtgttcgaagctcaaattcatcgaccccaagaagatccgggtcttt
gtcctggacgaggccgacgtcatgatcgccacccaggggcaccaggaccagagcatccgc
atccagaggatgcttccccgggattgccagatgctgctcttctcggccaccttcgaggac
tcggtgtggaagtttgcccagaaggtggttcccgaccccaacatcatcaagctgaagagg
gaggaggagacgctggacaccatcaagcagtactacgtgctctgcagcagccgggaggag
aagttccacgccctctgcaacatctacggggccatcaccatcgcccaggccatgatcttc
tgccacacccgcaagacggccgggtggctggcgggggagctgtccaaagaaggccaccag
gtggccctcctgagcggggagatgatggtggagcagcgggcggccgtgatcgagcgcttc
agggagggcaaggagaaggtcctggtcaccaccaacgtctgcgctcgaggcatagacgtg
gagcaagtctccgtggtcatcaacttcgacctcccggtggacaaagacgggaacccggac
aacgagacctacctgcaccgcatcggccgcacggggcgcttcggcaagcgaggcctggcc
gtcaacatggtggacagcaagcacagcatgaacatcctcagccgcatccaggagcatttc
aacaagaagatccataaattggatacggatgatttggatgagattgagaaaattgctaac
tga
DBGET
integrated database retrieval system
