Thamnophis sirtalis (common garter snake): 106547466
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Entry
106547466 CDS
T06107
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04142
Lysosome
tsr04144
Endocytosis
tsr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106547466
04142 Lysosome
106547466
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106547466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106547466
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106547466
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106547466
Exosome [BR:
tsr04147
]
Exosomal proteins
Proteins found in most exosomes
106547466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
106547466
NCBI-ProteinID:
XP_013920128
UniProt:
A0A6I9Y5V5
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVMHTHLLNPEWLVNFFGSLSVEDS
VECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQ
DPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDF
VHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTD
ELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFYDSC
VVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWVSVLEEN
NPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRN
LQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTSAIQ
VLIEHIGNLDRAYEFAERCNEPAVWSQLGRAQLQKDLVKEAIDSYIKADDPSAYMEVVEA
ANRNDNWEDLVKFLQMAQKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQQVGD
RCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQVAVDSARKANSTRTWKEVCFACVNG
KEFRLAQICGLHIVIHADELEELISYYQGRGYFEELIGLLEAALGLERAHMGMFTELAIL
YSKYKPQKMREHLELFWSRVNIPKVLRAAEHAHLWGELVFLYDKYEEYDNAIMTMMNHPT
DAWKEVQFKDIIAKVANVELYYRALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFAKVN
QLPLVKPYLRSVQNHNNKGVNEALNNLLTKEEDYQGLRASIDAYDNFDNITLAQRLEKHK
LIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDPELAEKLLQWFLEEDKK
ECFAASLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLDASESLRKDE
EQVAEPTPIVFGLTLDAQSKPYLLTVPTEEKEALVRQSGFPVLFYKYSPHLLYC
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccactacgaccgagcccacattgctcagctgtgtgaaaaggccggcctgctg
cagagagctttggaacactacacggatctctacgatatcaagcgtgctgtcatgcatact
caccttctgaatccagagtggctggtgaatttctttggctccctgtctgttgaagattcc
gtcgagtgcctgcgagcaatgttgtctgccaacatccgccaaaatcttcagctgtgcgtc
caggtggcttccaagtatcacgaacagttgggcacacagtcccttgtggaactgttcgag
tccttcaaaagctacgaaggactcttctatttcttgggttctattgtcaacttcagccaa
gacccagatgtccattttaagtacatccaggcggcttgcaagaccggccaaatcaaagag
gtcgaaaggatctgccgcgaaagcaactgttacaatccagaacgagtgaagaatttcctg
aaggaagccaagctcacagaccagcttcccttgatcatcgtctgtgacagatttgacttt
gttcacgacttggttctttacttgtaccgcaacaacttacagaagtacatcgagatctat
gttcagaaggtcaatcccagccgcatccctgccgtcgtgggaggtctcttagacgtggac
tgctcggaagatgtcattaagaacttgatcatggtggtgagaggtcagttctcgaccgac
gaattggtggccgaagttgagaagaggaacaggcttaagctgctcctgccttggctggag
tctcggattcacgaaggctgcgaagagccggcaacgcacaacgccctggcgaaaatctac
atcgacagcaacaacaaccccgagcgcttcctgcgggagaatcccttttacgacagctgt
gttgtcggaaagtattgtgaaaagagagaccctcacctggcctgtgtggcttatgaaagg
gggcagtgtgacctcgagctcatcaaggtttgcaatgagaattctttatttaaaagcgaa
gctcgttacttggtgcgaaggaaagatccagaattgtgggtcagtgttttggaggagaac
aaccccttcagaagacccctcattgatcaggttgtccagacggcgttatcggaaactcaa
gatccggaagaggtttctgtgacggtgaaagcattcatgacagccgacctccccaacgaa
ctgattgagctgctcgaaaagattgtcctggataattctgtcttcagcgagcacaggaat
ctgcagaacctcttgatcttgacggccatcaaagccgaccgcactcgggtgatggagtac
atcaaccggctggataactacgatgctcccgatatcgccaacatcgccatcagcaatgag
ctctatgaggaagccttcgctatcttcaggaagttcgacgtcaacacttccgccattcag
gtgttgatagaacacatcggcaatttggaccgtgcctatgaatttgccgagaggtgtaac
gagccagctgtgtggagtcagctgggcagagcccagcttcagaaggatctggttaaggaa
gcgatagattcctacataaaggcggatgatccttctgcctatatggaggtggtggaggca
gccaacagaaacgataactgggaggacctagtcaaattcttgcaaatggcccagaagaaa
gccagagaatcttatgttgagaccgaactgatttttgccttagccaaaacaaaccgactt
tcagagctagaagaatttgtcagtggccctaacaacgcacacatacagcaggtcggcgac
cgatgctacgaggaagggatgtacgatgcggccaagctgctctacaataacgtgtcgaat
tttgcgcgcctggcctccaccttggtgcacctaggggagtaccaagtagctgtcgacagc
gcccgcaaagccaacagcaccaggacgtggaaggaggtgtgttttgcctgcgtgaatgga
aaggagttccgccttgcgcagatatgcggcttgcacatcgtcattcacgcggatgaactg
gaagaactgataagctactaccagggccgcggatattttgaggagctgattggtctcttg
gaagccgctctcggtctggaacgggcccacatgggaatgtttaccgagcttgctatttta
tattccaaatataaaccccagaagatgagagaacatctggagctgttctggtccagagtc
aatatcccaaaggtccttcgagcagcagaacatgcccacctctggggagagcttgtcttc
ctctacgataaatacgaagaatatgacaacgcaatcatgaccatgatgaaccatcccacg
gatgcttggaaggaagtacagttcaaggacatcattgcaaaggttgccaatgtggagttg
tattatagagcccttcaattttatttggattacaagccgctgctgatcaacgacctcctc
ctcgtattatctccacggctggatcacaccaggacggtcagcttcttcgccaaggttaac
cagctacctctcgtgaaaccttatttgcgctcagtccagaatcacaacaacaaaggcgtc
aacgaggcactgaacaaccttctgacgaaggaggaagattaccaaggcctgcgagcgtct
atcgatgcctatgataactttgataacatcaccttggctcagcgtcttgaaaagcacaaa
ctaattgagttccggcgcatcgccgcttatttgtacaaaggcaacaaccggtggaagcag
agcgtggaactttgcaagaaagatcggctttataaggatgccatgcaatatgcagccgag
tccaaagaccccgaactggctgagaagctccttcagtggttcctggaggaagacaagaaa
gagtgttttgcagcctctctcttcacgtgttacgacttgctgcatccagatgtggtcctg
gagttggcatggcgacacaacattatggactttgcgatgccttacttcattcaggtgatg
agggagtaccttaccaaagtggataaactcgatgcttcggaaagtctaaggaaagacgag
gagcaagtagcagaacctactcctatagtatttggcctcaccttagatgctcaaagtaaa
ccgtacttgcttactgtgccaactgaagagaaggaggccctggtacgtcagagtggtttc
cccgtgctattctataaatattccccccatctgctctattgctga
DBGET
integrated database retrieval system
