Thamnophis sirtalis (common garter snake): 106547556
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Entry
106547556 CDS
T06107
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03440
Homologous recombination
tsr03450
Non-homologous end-joining
tsr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106547556
03450 Non-homologous end-joining
106547556
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106547556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsr03032
]
106547556
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106547556
DNA replication proteins [BR:
tsr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106547556
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106547556
BRCA1-C complex
106547556
NHEJ (non-homologous end-joining)
MRX complex
106547556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad50_zn_hook
SbcC_Walker_B
AAA_21
DUF2703
Motif
Other DBs
NCBI-GeneID:
106547556
NCBI-ProteinID:
XP_013920249
UniProt:
A0A6I9XVR0
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MEVEQNLVKVMRLDNESKALESRRKQMEKDNEDLQQKMEKVFQGSDEQLRRMYQNHQKTV
REKEKRLTECQRELEAVNKEFLRFNKEKSELLVEQGRLQIQADRYQQHIRTRDSLIQSLA
AQLELEGFERAPLNERQINNFQRLVKERQDKDMETANNLMKEFSEKETIKQKQMDEIRDK
KTGLERTIVLKADIQNKKQVEVKNLKQELHQLEGSSNRLLELDQEFTKAKHELAEAEKNC
NVETLEMEIKELQREKTNLDGTLRKLDKEMEQLNLNTAIITQMDMLKKDKADKEDQIRKI
KFRHNEDLICLLGFFPSKNQLEDWLHSRVKEINQTRDKLAKLNKELVSAEQNKSHITTEL
RKKEEQLSTYEEKLFDVCGSQDFESDLNKLQHDIDKTSKQRAMLAGATAVYSQFITQLTD
ESQSCCPVCQRVFQTEAELQDVINDLQAKLRLAPDKLKTTESELKKREKKRDDMISLKPI
RQTISELHEKDIPELRNKLQVLNREIQSLKADIEEQETLLSTIITEEGSAKACLQDITLM
ERDQIDLKDIERKIAQQSARLQGVDLGRTLLQVSQEKQEKKHQWDTVTSKIELKQTLKQD
QQNQVQYLKCTVNELKAEKLQISSSMQRRQQLEEQTVELATEVQSLNREIKEAKEQLFPL
ETTLGKLQQEKEELLNKKNTSYKITQEKINDIKEKVKNVHNHMKEIENYIQEGKEEYKQQ
KESELEEVTFQVVDCEKKKEKINKEMGTIRQDIDTQKIQERWLEDNLTLRKRKEDLKEVE
DNIKQLLKEMGEMQVPQLKRNQKHFEEKIEDLKRSHSLALGRQHGFEEEILRYKRELKEQ
QFKDAEEKYREMMIVMRTTELANKDLDIYYRALDQAIMTFHSMKMEEINKIIRDLWRSTY
RGQDIDYIEIRSDADENISASDKRRSYNYRVVMTKGDTALDMRGRCSAGQKVLASLIIRL
ALAESFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVE
LLSRSEYVDKFYRIKKNLDQCSEIVKCSVTTLGSYVH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaacagaatcttgtaaaagtaatgagactagataatgaaagcaaagctttg
gaaagtcggagaaagcagatggaaaaggataatgaagacctgcaacaaaaaatggagaag
gtttttcaaggaagtgatgagcaacttagaagaatgtatcaaaaccatcagaaaactgtg
agagaaaaggagaagcggttaacggagtgtcagcgagaactggaggcagtaaacaaagaa
tttctaagatttaataaagaaaaatcagaattattagttgaacaaggtcgtcttcagata
caggcagatcgttaccagcagcatattagaacccgagattcattaattcaatctttggca
gctcagttggaattggaaggatttgaaagagcacctttaaacgaaaggcaaatcaataat
tttcagaggctggtaaaagagagacaggacaaagatatggaaactgctaataatttaatg
aaagaatttagcgagaaggaaacaattaaacagaaacaaatggatgaaataagggataaa
aaaactggacttgaaagaactattgtcctaaaggcagatattcaaaacaagaaacaagtt
gaagtaaagaatctgaaacaggaattacatcagctggaaggatcatcaaatcgactccta
gaactggaccaagaatttacaaaagcaaaacatgaattagctgaagctgagaaaaattgc
aacgttgaaaccctagaaatggaaattaaggaactgcaaagagaaaagacaaatttggac
ggtactcttcggaaactggataaagagatggaacaactgaacctgaatactgcaattata
acccaaatggacatgctgaaaaaagataaagctgacaaagaagaccaaatcagaaaaatt
aaatttagacacaatgaagatttaatctgcttgttgggatttttcccaagcaaaaatcag
cttgaagattggcttcactcaagagttaaagaaattaaccaaacaagagacaagcttgcc
aagctcaacaaagaacttgtttcagcagaacaaaacaaaagtcatattaccaccgaacta
aggaaaaaggaggaacagctgtccacatatgaagaaaagctttttgatgtctgtggaagt
caagactttgaaagtgatcttaataaactgcagcatgatattgataaaacatccaaacag
cgagctatgcttgcaggagccacagcagtttattctcagttcatcacacaactaacagac
gaaagccagtcatgttgtcccgtgtgtcagagggtctttcaaactgaggcagaactgcaa
gatgtcataaatgatcttcaagccaaactgcgccttgctccagacaaactgaagacaaca
gaatccgaacttaagaaaagggagaagaaacgagatgatatgatttctctgaaacctatc
agacaaacgatatctgaactccatgaaaaggatatacctgagttgagaaacaagctacag
gtccttaatagagagattcaaagccttaaagctgatatagaagaacaggaaaccctcttg
agtactatcataacagaggaaggaagtgcaaaagcatgtctgcaggatattacacttatg
gaaagggatcagattgatctaaaggatattgaaagaaaaattgctcagcagtctgctagg
ctccagggagtggatttgggccggactcttttgcaagtgagccaagagaaacaggaaaaa
aaacatcagtgggatacagttactagcaaaattgaactgaagcagacactcaagcaagat
caacaaaatcaagtccagtatttaaagtgcacagtaaatgaactcaaagctgagaaactt
cagatttccagcagcatgcagcgtcgacagcaacttgaagaacagactgtagaattagca
accgaggtgcaatctttaaacagagagatcaaggaagcaaaggagcagttatttcctttg
gaaacaactttgggaaaactacaacaagaaaaagaagagttgttgaacaaaaagaataca
agttacaaaataacacaagagaagataaatgatattaaagaaaaagttaaaaatgtccat
aaccatatgaaagagattgagaattatatccaagaagggaaagaagaatacaagcagcaa
aaggaatctgaactggaggaagtcacatttcaggtagtagattgtgagaaaaagaaagag
aagataaataaagaaatgggaacaattaggcaagatattgatacacaaaagattcaggaa
cgatggttagaagataatcttactttaagaaaaagaaaggaagatctaaaagaagttgaa
gataacataaaacagcttttgaaggaaatgggggaaatgcaagtaccacaactgaaaaga
aatcaaaaacattttgaagaaaaaatagaggatttgaaaagaagccatagtttggcactg
ggtcggcagcatggatttgaggaggagatcctgagatataaaagagagctgaaagaacaa
cagtttaaagatgctgaagagaaatatagagaaatgatgatagttatgaggaccacagaa
ctggcaaacaaggatcttgacatttattatagagcactggatcaagcaataatgacattt
catagcatgaaaatggaagaaattaacaagataattcgtgacctgtggcgaagcacgtac
aggggacaagatattgactatatagaaattcggtctgatgctgatgagaatatatctgct
tctgacaaaaggaggagttacaattacagggtagtcatgacaaaaggagacactgctcta
gatatgaggggcaggtgcagtgctggccaaaaggttcttgcctctctcattattcgtctt
gctctggctgaatccttttgtctcaattgtggcattcttgcattggatgagcctaccacc
aatcttgaccgagaaaatattgaatctcttgcacatgctttggtggagataatcaaaagt
agatctcagcaacgtaactttcagctgcttgtgataacccacgatgaagattttgtggag
ctgttgagtcgatccgaatatgtggataaattctatagaattaagaagaaccttgaccag
tgttctgagattgtgaaatgtagtgtcacaactttgggatcatatgttcactag
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integrated database retrieval system
