KEGG   Thamnophis sirtalis (common garter snake): 106547566
Entry
106547566         CDS       T06107                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04115  p53 signaling pathway
tsr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106547566
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    106547566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106547566
Enzymes [BR:tsr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106547566
Ubiquitin system [BR:tsr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106547566
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106547566
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st WD40_like Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_RIG_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 106547566
NCBI-ProteinID: XP_013920262
UniProt: A0A6I9Y0E5
LinkDB
Position
Unknown
AA seq 265 aa
MTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDP
KLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLR
NTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFV
GLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR
ALPDGESNVLIAANSQGTIKVLELV
NT seq 798 nt   +upstreamnt  +downstreamnt
atgacatgtaattccaaaatcagctgtatcagctggagtagttaccacaaaaaccttttg
gccagcagtgactatgaaggaacagtgatcttatgggatggattcacaggtcaacgttca
aaggtctatcaggagcatgagaaaagatgctggagtgtggactttaatttgatggatcct
aaactcttggcttcaggttctgatgatgcaaaagtgaagctatggtcaaccaacctggac
aattcagtagcaagcattgaggcaaaggcaaatgtgtgttgtgtaaaattcagcccctca
tccaggtatcatcttgcttttggctgtgcagatcactgtgtccactactatgatcttcgg
aacactaaacagcccattatggtcttcaagggacaccgcaaagctgtttcatatgcaaag
tttgttagcggagaagaaatagtctctgcgtcaacagatagccaactaaagctgtggaat
gtagggaagccacattgtttgcgttcttttaagggtcacatcaatgagaagaattttgta
ggcttggcatctaatggagactatattgcctgtggaagtgaaaataattcactttacctg
tactataaaggtctctcaaagacactgctaaccttcaaatttgacactgtcaaaagtgtc
ctggacaaagaccgtaaggaggatgacacaaatgaatttgtcagtgctgtatgctggagg
gcactaccagatggggagtccaatgtattgattgctgctaacagtcagggtacaattaag
gtactggaactggtatga

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