Thamnophis sirtalis (common garter snake): 106547572
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Entry
106547572 CDS
T06107
Symbol
SCN1B
Name
(RefSeq) sodium channel subunit beta-1
KO
K04845
voltage-gated sodium channel type I beta
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04261
Adrenergic signaling in cardiomyocytes
tsr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106547572 (SCN1B)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
106547572 (SCN1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106547572 (SCN1B)
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106547572 (SCN1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_2
DUF5326
Ig_3
Motif
Other DBs
NCBI-GeneID:
106547572
NCBI-ProteinID:
XP_013920271
UniProt:
A0A6I9Y1F3
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MAAPRPVSLLLCLALVTLCQGGCVEVDAETEAVVGHTFKIRCISCKKRSETEAEAFTEWF
FKEEGTTELVKILRYDFYDKLSIYDPRFEDLVMWNGTKNIADLQDVSIFILNVTEEHRGE
YICSVNRTLHYANEFSYNIMVNKTIHLSVVHKANRDMASIVSEIMMYVLIVVLTIWLVAE
MIYCYKKIAAATEAAAQENASEYLAITSESKENCTGVQVAE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgcgacccgtctcgctgctcctctgcttggccttggtgaccttgtgccaa
ggtggctgcgtggaggtggatgcagaaacagaggctgtagttggccatactttcaagatc
cgttgtatctcatgcaagaagcgcagtgaaacagaggccgaggcctttactgaatggttc
ttcaaagaagaagggaccaccgaattggtcaagattcttcgctatgatttctatgataag
ctctctatatacgatcctcgctttgaagatctagtgatgtggaatggtaccaagaacatt
gcagatttgcaggatgtctccattttcatcctgaacgtgactgaagaacacagaggggag
tacatctgcagtgtcaaccgcaccctccattatgccaatgagttctcctacaacataatg
gtcaacaagaccatccacctgtctgtggttcataaagccaatcgggatatggcatctatt
gtctccgaaatcatgatgtacgtcctcatcgttgtcctgaccatctggctggtagcggag
atgatctattgctacaagaagatcgccgcagcgacagaggcagctgctcaagaaaatgcc
tccgaatacttggccatcacatcggaaagtaaagaaaactgcacaggggtgcaggtagct
gaatag
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