Thamnophis sirtalis (common garter snake): 106547576
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Entry
106547576 CDS
T06107
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03266
Virion - Herpesvirus
tsr04514
Cell adhesion molecules
tsr04520
Adherens junction
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
106547576
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106547576
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106547576
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106547576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106547576
04090 CD molecules [BR:
tsr04090
]
106547576
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
Nectin family
106547576
CD molecules [BR:
tsr04090
]
Proteins
106547576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
C2-set_2
ig
Ig_3
I-set
Ig_2
TM_ErbB1
C1-set
C2-set_3
Podoplanin
Motif
Other DBs
NCBI-GeneID:
106547576
NCBI-ProteinID:
XP_013920276
UniProt:
A0A6I9Y1F7
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MGWPRRTGAWASLLWGCLSVALAQQVTVSHEVTGYLGKRVVLPCNIAVTGPDMKVSQVTW
VKEVGGRRQNVAVHHPVHGQNYPMEKNSRRISFSTQSLTDASLIIEHLLMTDEGTYSCEF
ATYPNGNEVGTTNLIILAKPTSSAEAVEVKSSNLEQPVAVCTSRNGKPPARVIWQSKLTG
NSSVKQTNNSDGTVTVTSHYNLIPTKEANEQQITCLVEHVALPQIESYPVQLSILYAPEV
SIEGYDDNWYLTRNDVILVCNAKGNPAPVDFSWSTSNGSLPKSVEVQGQRLFVKKVDYSV
NTTFICQATNRVGRVSTHQIILVRDQPVKSQSRNVGALAGGIVGGILALAVLGIIVFFIL
HRRHPRASKGSFDSKTRVFGNGTSQPPTHDFTELDRPLKPATGRKLEEDDDDYGEEEREE
RRHPPYGYAPRHREDEGERFDQLGPILRFSPDPHGYDYDDMESQHDGSIISKTAVYV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggctggccgcggcggacgggcgcttgggcgagcctcctgtggggctgcctctccgtt
gcccttgcccagcaagtgacggtcagccatgaggtcaccgggtacctggggaagagagtg
gttctgccctgcaacattgcggtaactggacctgacatgaaagtcagccaagtgacctgg
gtgaaggaggtcggaggtcggaggcagaatgtggccgtccaccatccagtgcatggacaa
aactacccgatggagaagaacagcaggcggatcagcttctccacacagtccttgacggac
gcctcgctgatcattgagcacctcctcatgacggacgagggcacctactcctgcgagttt
gccacctatcccaacggcaacgaagtcggcaccaccaacctgatcatcttagccaagccg
accagtagtgctgaggccgtggaggtcaaatccagcaacctggagcagcccgtggccgtg
tgcacatccagaaacgggaagcctccggctcgcgtcatctggcagtcgaagctgactggc
aactccagcgtcaagcagacgaataactccgacggcaccgtcaccgtcaccagccactac
aacctgatccccaccaaggaagccaacgagcagcagatcacctgcctcgtggaacacgtg
gccctaccacagatcgagtcctacccagtccaactttccatattgtatgctcctgaggtt
tccatagagggctacgacgataactggtatttgacccgcaatgatgtcatcctcgtttgc
aacgcgaaggggaatcccgccccggtagatttctcctggagcacgtccaatgggtcactt
ccgaagtcggtagaggttcagggtcagcgcctcttcgtgaaaaaagtggattactctgtg
aataccaccttcatctgccaagccaccaatcgcgtcgggcgggtttcgacacaccaaatc
atcctcgtccgagaccagccagtgaagagtcagagccgcaacgttggagccctggccggg
ggtatcgtgggggggatcctggccctggcagttctggggatcatagtcttcttcatcctg
caccgccggcacccccgagcttccaaaggttcctttgactccaagacacgagtctttggc
aacggcacttctcagcccccgacgcacgacttcaccgagctcgaccggccgctgaaaccc
gctacgggccgaaaactggaggaggacgatgacgattacggagaggaggagcgtgaggag
cggcggcaccctccctatggctacgccccgcggcaccgggaagacgagggggaacggttt
gaccagctgggcccgatcctgcggttcagccctgacccgcacggctacgactacgacgac
atggaatcgcagcatgacgggtccatcatctccaaaacggcagtctacgtgtga
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integrated database retrieval system
