KEGG   Thamnophis sirtalis (common garter snake): 106547737
Entry
106547737         CDS       T06107                                 
Symbol
LARP1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsr03019]
    106547737 (LARP1)
Messenger RNA biogenesis [BR:tsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106547737 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 106547737
NCBI-ProteinID: XP_013920459
UniProt: A0A6I9XW90
LinkDB
Position
Unknown
AA seq 1098 aa
MATQVEALLPANPLLPAEEHGLVIKKPQEKGEHLMHQGEKANADEGKGGGPDSCSKEEGG
CGGNVGDHLRRNGALLKPPSIKQQKEDSNHQEKENLLHQRSGGIIESNRLPGEASSSSSS
GGEEGGEQGGVGRKEFIEAPPPKVNPWTKNASAALVTLNGQSPPEHSTPAKVVKAATIRQ
RKGSKVGDFGDATNWPTPGEIAHKSIQQLSQKSQSLRKLHIKKSMREQEKGEGSDGKENM
KTRSDESGEEKNGDDDNQKLAQKKKGSRHKWVPLQIDMKSEVPRDKTASRNNRQNEQHRH
PSNNRSESKGWHLDNKHERNWPDHDETSSVKSDGATVRGAFRGRGRGRGRGRGRGRGGTR
SHFDYHYGYRKFDASDGTRTQKYTSNITYYFDNISSTELYSVDQELLKDYIKRQIEYYFS
VDNLERDFFLRRKMDTEGFLPITLIASFHRVQALTTDVGLIIKALKDSKVVEIVDQKIRR
KEEPEKWPLPGPPMADYTQTDFSQLINCPEFVPRQNFQKETESAPGSPRSASPMPSKTEE
VSNLKTMPKGLSASLPDLDSEAWIEVKKRPRPSPIRPKKAEESRTPLKQKDQDEPEELDF
LFDEEMEQMDGRKNTFTDWSDEDSDYEIDDRDVNKILIVTQTPPYLRRHPGGDRTGNHTS
RAKMSSELAKVINDGLYYYEQDLWTEQFEPEYSQIKQEVENFKKVNMITREQFDTLTPEP
PVDPNQEVPPGPPRFQQVPTDALANKLFGVPEPSTIARSLPTTVPESPNYRNARTPRTPR
TPQLKDPTQTPRFYPVVKEGRLIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTAS
ISSSPSEGTPAIGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIG
QSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLSLEDAKEGYRYGLECLFRYYSYGLEKKFR
PDIFKDFQEETIRDFEAGQLYGLEKFWAFLKYSKAKNLDIDSKLQEYLSKFRRLEDFRVD
PPIGEEGSHKRYAATIGVDGRKRYPSQSSSKTVGHTPSNQMSASSSQDPNTSSQEDAKNL
SQPHAVSTATVETQTVGK
NT seq 3297 nt   +upstreamnt  +downstreamnt
atggctacccaggtggaagctctactgcccgccaacccgctcctgcctgccgaggaacac
gggctggttatcaagaagcctcaagagaagggcgagcacctcatgcaccaaggagagaag
gccaacgccgatgagggcaaggggggcggccccgacagctgcagcaaggaagaaggcggc
tgcggcggcaacgtgggagaccatctgcgccgaaacggggccctgctgaagccccccagc
atcaagcagcagaaggaggacagcaaccaccaggagaaggagaacctgctgcaccaaagg
agcggcggcattatagagtcaaaccggctgcccggagaagctagcagcagcagcagcagc
ggcggcgaggaaggcggcgagcagggaggagttggccgcaaggaattcatcgaggcccct
ccacccaaggtgaacccttggactaaaaacgcctcggcggcgttagtcactctcaacgga
cagtctcctccagaacattcaactccagccaaagtggtaaaagcagcaaccataaggcag
aggaaaggaagcaaggttggtgactttggggatgctacaaattggccaacaccaggagaa
atagctcacaagagtatacagcagttgtcacaaaaatcccaatctctacggaaacttcat
attaagaaaagtatgagggagcaggagaaaggggaaggaagtgatggcaaagagaacatg
aaaactcgatccgatgaatcaggagaagagaaaaatggagatgatgacaaccagaaattg
gctcagaagaaaaagggcagtagacacaaatgggtacccctgcaaatagatatgaagtct
gaagtgccaagggataaaaccgcttctcgtaacaacagacaaaatgagcagcaccggcat
ccttccaacaaccgaagtgaatcaaaaggatggcatttagataacaagcatgaacggaat
tggcctgaccatgatgaaacttctagtgttaaaagcgatggggcaacagttcgtggtgct
ttcaggggcagaggacgtggccggggacgagggagagggagaggaagaggaggtactcgc
tctcactttgattatcattatggatatcggaaatttgatgcttctgatggcacacgtaca
cagaaatacactagtaatattacttactactttgataatatcagtagtactgagctctac
agtgttgaccaagaactgctcaaagactacatcaaacgacagatagaatactacttcagt
gtcgacaacttggaaagagactttttcttgaggcggaaaatggacactgaaggtttcctt
cccatcactctcattgccagcttccatcgggtacaagccctcaccacagatgttggcctt
atcattaaggcattaaaagacagcaaggtggtggagattgtggaccagaaaatcaggaga
aaagaagaaccagagaaatggcctttgcctggcccccccatggcagactatacacaaaca
gacttctctcagctaatcaactgcccagaatttgtgcccaggcagaacttccaaaaagag
acagaatctgctcctggttctccccgctctgccagtcccatgccaagcaagacagaggaa
gttagtaatttgaagacaatgcctaaaggtctttctgccagcctgcctgacttggactca
gaggcgtggattgaagtgaagaagaggcctcgaccatctcccatcagacccaagaaagca
gaagagtctagaacaccactgaagcagaaggatcaggatgaaccagaggagttggacttt
ctttttgatgaggaaatggaacagatggatggtcgtaaaaacaccttcactgattggtca
gatgaggattcagactatgagattgatgacagggacgtgaataaaattttgattgtaaca
cagacacccccctatctacgccgtcatccagggggagacagaacaggcaaccacacttcc
agggcaaagatgagctcagaattggccaaagtgatcaatgatggactatattactatgaa
caggacctatggacagaacagtttgaaccagaatattctcagataaagcaagaagtagaa
aacttcaagaaggtgaatatgatcaccagagagcagtttgacacacttacccctgagcct
cctgttgatccaaatcaagaagttcccccaggaccacccaggttccagcaagttccaacc
gatgctctggcaaataaactctttggtgtgcccgaaccttcaaccattgcccgatctttg
ccaacaactgtgccagaatccccaaactaccgcaatgcaagaactcctcggacccctcgt
actcctcagttgaaagaccccacacagacgcctcgattttacccagtggttaaggaaggc
agattgatagacgccaagacaccccggaaaaggaaaacacggcacagttcaaatccccca
atggagtgtcacgttggttgggtgatggattctcgggagcatagacctcgaacagcatcc
atcagttccagtccttcagaaggcacccctgctataggcagctatggctgcacaccacag
tcattgcctaagttccagcatccttcccacgaactcctgaaagaaaatggcttcacacaa
catgtctaccacaagtatcgccggcgctgccttaatgaacggaaacgactgggcattggc
cagtcccaagaaatgaatactctctttagattctggtcatttttccttcgggatcacttt
aacaagaaaatgtatgaggaatttaagcaactgtctctggaggatgcaaaggaagggtac
aggtatggactggagtgcctcttcagatattacagttatggactggagaaaaaattccgg
cctgacatatttaaagattttcaagaagaaactataagagattttgaggctggccagctt
tatgggcttgaaaaattttgggccttcctaaaatattccaaagccaaaaacttggacatt
gacagtaaattgcaagaatacctcagcaaattccgccgccttgaagacttcagagttgat
cctcctataggggaagaaggtagccacaagagatatgctgcaaccataggagtagatgga
aggaagcgatatccatcgcagtcttctagcaagactgttggccatactccatccaatcaa
atgtctgcctcatccagccaagaccccaacacatcaagccaggaagatgccaaaaacctg
agccagccacatgcagtttccacagccacagtggaaacccaaacagtggggaagtag

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