Thamnophis sirtalis (common garter snake): 106547747
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Entry
106547747 CDS
T06107
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106547747 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106547747 (CAPN3)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
106547747 (CAPN3)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C2: calpain family
106547747 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
106547747
NCBI-ProteinID:
XP_013920473
UniProt:
A0A6I9Y681
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MPSTISSTVVQKTGSEPIPCQHATTTTETGAGTGGIYSAILSRNHPITEVKEKTFHELHK
KCLEKKILYEDPDFPANDSSLFFSHRLQVKFEWKRPSEICENPRFILGGANRSDICQGEL
GDCWFLAAIACLTLNEKLLFRVIPEGQTFTKDYAGIFHFQFWRYGSWVEVIIDDRLPTYG
KHLVFTKSSQQNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAPK
DTYKIMKHAIERGSLMACSIEDSSGFIYGSAPTTDIGQFIAQKLQKMNFEFLNESTEETE
DRTTRTIIPMLYERRMTNGLVTGHAYSVTGVEDVTLKGEKIKLVRLRNPWGQVEWNGAWS
DSSDEWNDIDNAEKVRLQHKIAEDGEFWISFQDFLRYFTKLEICNLTPDTLEADKLYTWT
VSVTEGQWVRGSTAGGCRNYPDTFWTNPQYRLKLLEEDDDPEDSEVICSFLVALMQKNRR
KERKLGANLLTIGFAIYEVPKEMQGDKKHLQKDFFLYNASKVKCKSYINMREITERFRLP
PKEYVIIPSTYEPHQEGEFILRVFSEKRSLSEEVENKIEAGNISPAERGTDAEEDKQFKN
IFRQIAGDDMEISADELRNVLNNVLKKHKSLKTEGFALESCRSMIALMDTDGSGKINLDE
FRHLWTKIKSWQKIFKCYDTDHSGTINSYEMRNAVKDAGFQLNNQLYDIITMRYGNRNMN
IEFDSFICCFVRLEGMFRAFQAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccactatcagtagcactgttgttcaaaagactggctctgaaccaattccctgt
cagcatgctaccacaaccacagaaacaggtgctggaacaggagggatttattctgccatc
ctcagccgcaaccatcccatcaccgaagtcaaggagaaaacctttcatgagcttcataag
aagtgccttgaaaagaagattctttatgaggatccagattttccagctaatgacagctcc
cttttcttcagtcacaggctccaagtcaaatttgagtggaaaagaccatcagaaatctgt
gagaatccacgctttatccttggtggagctaataggtctgacatttgtcaaggggaacta
ggggattgttggtttctggctgccattgcttgtctgaccctgaatgaaaaattgttgttt
cgggtcattccagagggtcagaccttcacaaaagattatgctgggatttttcacttccag
ttctggcgttatggaagttgggtggaagttattatcgatgatcgtttaccaacatatgga
aaacatctggtcttcactaaatcctcccagcagaatgaattctggagtgcattactggaa
aaagcttatgcaaagcttcacgggtcctatgaagcattaaaaggaggcaacaccacagag
gccatggaggatttcacaggaggagtgacagaattctatgagataaaggatgctcctaaa
gatacatataaaatcatgaagcatgccattgagagagggtcacttatggcttgttccatt
gaggacagttcaggatttatttatggaagtgcccctacaactgatattggacaattcatt
gcccaaaagttgcagaagatgaattttgaatttttgaatgagtcaactgaagaaacagaa
gacagaacaacccggaccatcattccaatgttgtatgaaaggcgcatgactaatggactg
gtcacaggccatgcatattcagtcacaggtgtagaagacgtaacacttaaaggggagaag
ataaaactggtgcggctcagaaatccctggggacaagtagaatggaacggagcttggagt
gatagctcagatgaatggaatgacattgataatgccgagaaggtccgcttgcaacataaa
attgcagaggatggagagttttggatatcattccaagattttctgagatatttcacaaag
ttggagatttgtaatctcacccccgatacccttgaggctgataagctttacacatggaca
gtttccgtcacagaaggacaatgggtgcgaggcagcactgcaggtggctgtcgtaactat
ccagacactttttggaccaatccccaatatcgtttgaaactcctggaagaagacgatgat
ccagaagatagtgaggtgatatgcagcttcctggtggcactgatgcagaaaaacaggaga
aaagagcgcaaactaggagccaatctcctcacaattggttttgccatctacgaggtgccg
aaagagatgcagggtgacaagaaacatttgcagaaggattttttcctttacaatgcctcc
aaagtaaaatgcaagtcttacataaacatgcgagaaatcacagaacgcttccggttacca
cccaaggagtatgtcatcattccatccacttatgaaccccaccaagaaggagaatttatc
ctgagagttttctcagaaaaaagaagtctttcagaggaagttgaaaataagattgaagca
ggaaatatctcgcctgcagaaaggggtacagatgctgaagaagataagcagttcaaaaat
atcttccggcaaattgctggggacgatatggagatcagcgctgatgaactaaggaatgtc
ctcaacaatgttctgaaaaaacataaaagtttgaaaacagaaggttttgccctggaatcc
tgccgcagcatgattgcgctaatggatacagatggttccgggaaaataaatcttgatgaa
tttcgccacctttggactaaaattaaaagctggcagaaaattttcaagtgttatgatacc
gaccattcaggaaccattaacagctatgagatgcgtaatgcagttaaagatgcagggttt
caattgaataaccaattatatgacatcattacaatgcgttacggtaacagaaatatgaat
atagaatttgacagttttatctgttgttttgtgcgactggaaggaatgttccgtgcattc
caggcctttgataaagatggagatggcattattaaactgaacgtcttagagtggctacag
ctcaccatgtatgcctga
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