Thamnophis sirtalis (common garter snake): 106547756
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Entry
106547756 CDS
T06107
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106547756 (SH3TC2)
Membrane trafficking [BR:
tsr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106547756 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_2
TPR_1
SH3_1
SNAP
HEAT_Nup120
TPR_2
Motif
Other DBs
NCBI-GeneID:
106547756
NCBI-ProteinID:
XP_013920482
UniProt:
A0A6I9Y0V4
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MSPDERPGAESKSSSIQSVLLASWSSLQHCQAETPERCFPEKKMASGNPKELDPGSHPAQ
IGEGTLETESVSLAVGEGFPNAISLSFSVKSHSAQDLNLQLQEVARKKLWALENDDKDVC
AVFKELSARLACIQAQENRFLLSFRTVEEIWKFSTYLALGYVGCCLEHLLFSPEYWLNCA
QVDDTEITVTVDEDCMTTMYLGLLLQEGNFFARATLTVPAEEEEEDLKLLKNELVHVKDI
GHETKWEGTSLLTDQRGLIHVTTIEPLPHPFYQWFLKNYPISCGISKEISGPDSLQIGQG
RCTATEDHRGKSWDELSYCKGDILEVIGFLIPGLRWFIGKSTTSGIIGFVQTKSVQLESC
ESMRNSPVFFSEEEISAFFQAPCNGNEVYYSNLLNEWAQTDITSVYRLDGFEPIVMYPQR
PPDAAVHGHKNGWMFENWGKQSYNSLCTQTDSEKSTPVAESSPSTLEHLLLPEPDDLDDP
KFFIDLNAGHMEDCDVFDPILTFLNQDSYVPHFQSLYDLSFSFLSSTFYGFTSEEELVVY
LETSRNWAKRGHLGWAHIRICYLLGRLCVRKAKFSQARVYFEEAMNAMDKGFEDLPLLTS
LHANLAAIYLKQKMKQKFLPMIGKGMTLLACLSGHCFSSETELEVVMYILREAITVSNTT
MEIRSCFLIVRLFLQLGKYDEVLPFAERLQFLNAQLTSQVTSTYPLDTMPFLAYLYEKKY
VPHVALAAARMYSPSNIKSGFTPIWRAGFILANTSKLLKAQEKSHNSISALACFYLHCGL
SFSHEAGTVSTEKALCALLSKLYLKYGMLEKAVHYSKQAVALSKVMGEEEAFEASLSLGW
LFTLNNQPDKTSEIMQYLLCSLRQTDSVTQDGVVHNLLAIALKREGQVQKAAENYFWALK
KAQENGNQRNQAIALANFGCLITSLGAYYLGEYYFLQAIQLYFELQDGDDTQMELVHILL
WLAQSKLERCKAEEGIIFYEMALAIALKTQNVISQLHVTESLCHFYSKVHPDTRTCILYH
EHQVLLLRQLQNREKEGHLLQDLSQLYQSLHTPRSLKQALDCTKQSLRIFIDLEEIVKTA
QAWLQAGRLYYQMQENELVEMYLQASIETALKPKELHLAMGLYEEAGDVFFNGIRNRHQA
VEYYRGGAIPLARKLRDPQTELRVFNKLAELQIGLHNYENALEFATLAVRLSVDVGDHLQ
ELVAFHRLATVYYLLQMYEMAEDCYLRTLSLHSPELQGVQEAIYYSRVYYRLGDLTLHKL
KDEQDAASYFFLALAATTEFDDRNWQGKIQARLAQIFTNSQTNKSPRGWTTYRARWLSEG
RHDV
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagatgaaaggccaggtgcagagtcaaaatcatcttctatccaatctgtactc
ctggcctcttggtcaagtctgcagcattgtcaagctgaaaccccagaaagatgcttccca
gagaagaagatggcatcaggtaaccccaaagaactggatccaggaagtcatcctgcacag
ataggagagggcactctggaaactgagtccgtgtcactggcagtaggggaagggttccca
aatgcaatttctctctcattttctgtcaagagtcactctgcacaggatctcaatctacag
ctacaagaggtggcaagaaagaaattatgggccctggaaaatgacgataaagatgtttgt
gctgttttcaaggagctgtcagccagactggcatgcatccaggcacaggagaatcgcttt
ctactttccttcagaactgtggaagaaatctggaagttttccacttatttggcacttgga
tatgtgggttgctgcctggaacaccttctcttcagtcccgagtactggttgaactgtgct
caagtagatgatactgagatcactgtcactgttgatgaggactgcatgaccaccatgtat
ctgggtcttctcctccaggaaggcaatttttttgccagagcaacactcactgtccctgca
gaggaagaagaagaggatttaaagctcctcaagaatgaattagtccatgtgaaagacatt
ggacatgaaactaagtgggaagggacatcattgttgaccgatcagagaggactgattcat
gtcacaactatagagccattgccccatcccttttaccagtggtttttgaagaattatcca
atcagttgtggcatatccaaagaaatcagtgggcctgactctttgcagattggccaaggg
aggtgcacagctactgaagatcacagaggaaaaagctgggatgaattgagttactgcaaa
ggggatatcctagaggtgatcggctttctcattccaggtctccgttggtttatagggaaa
tccacaactagcgggataattggctttgtccaaaccaaatcagtgcagcttgagagttgt
gaatcaatgagaaacagcccagtgttttttagtgaagaagaaatttctgccttcttccag
gctccttgtaatggcaatgaggtatattacagtaatcttcttaatgaatgggcacagaca
gacatcacctctgtatatagactggatggctttgaacctattgtgatgtacccacaaaga
ccaccagatgctgctgtacatggacataagaatggttggatgtttgaaaattgggggaag
caatcttacaacagtttatgtactcagactgattctgagaagtcaactccagtggctgaa
tcctcaccttccacccttgaacatttacttctgccagagccagatgaccttgatgacccc
aagttctttattgatctaaatgctgggcatatggaagactgtgatgtgtttgatcctata
ttgactttcctcaatcaagatagctatgtgccacatttccaaagtctgtatgatctctct
ttttccttcctcagttctaccttctatggtttcaccagtgaagaggagttagtcgtatat
ctggaaacatccaggaactgggctaagcggggccaccttggttgggctcacattcggata
tgctatcttttgggccgcctctgtgtcaggaaggccaagttctcccaagcgcgagtctac
ttcgaggaagccatgaatgctatggacaaggggttcgaagatctacctctacttacatca
ttgcatgccaaccttgctgccatttatttaaagcaaaagatgaagcaaaagttcttgcct
atgattgggaaaggcatgacacttctggcctgcttgtctggacactgcttcagttctgag
actgaactagaggttgtaatgtacatcctgagagaagccattactgtaagcaatacaaca
atggagattaggtcctgcttcctcattgtcagactcttcttgcagctgggtaaatatgat
gaggttcttccttttgcagaacgcttgcagtttctgaacgcacagctcaccagccaggtt
accagcacgtatcctttagatacaatgccttttctcgcctatctgtatgaaaaaaagtat
gtgccccatgtagctttggcggctgccaggatgtactcccctagcaatataaaaagtggc
ttcacacccatttggagagctggattcatccttgcaaacacctctaagctcttgaaagcc
caagagaaaagccacaacagcatctcagcgctggcttgcttctatctgcattgcgggttg
tccttctcccacgaagctgggactgtatcaactgaaaaggccttgtgtgcacttttatcc
aaattgtacctcaaatacggcatgctagaaaaggctgtgcattactccaaacaagctgtt
gccctgagtaaagtgatgggtgaagaagaagcatttgaagcatccctttctttggggtgg
ctgtttactttgaacaatcagccagacaagacctcagagatcatgcaatatctcctgtgt
tccctgcggcagacagacagtgtcacacaagatggggtggttcacaatcttttagccatt
gcccttaaaagagaggggcaggtgcaaaaggcagcagagaactacttctgggccttgaag
aaagcccaggaaaatggaaatcagcggaaccaagccattgccttagccaactttggttgc
ctaatcacatctttgggggcttactatttaggagaatactattttctccaagccattcag
ttgtattttgaactccaggatggtgatgatacacaaatggaactggtgcacattttgtta
tggttggctcagtccaagctagagagatgtaaggcagaagaaggcatcatcttttacgag
atggccttggccattgccttgaagactcaaaatgtgataagtcaacttcatgtcactgag
tccctctgccatttctatagtaaagtgcatcctgatactagaacctgcattctataccat
gagcatcaagttctcctacttcggcaacttcagaacagagaaaaagaaggacacctttta
caggacctcagccaactctaccaaagtttacatacacccaggtctttgaaacaggcattg
gactgtaccaagcagagcctcagaatatttattgacctggaggaaattgttaaaacagct
caggcctggttacaggctggtaggctctattatcaaatgcaagagaacgaacttgtggaa
atgtatttacaggcatccatagagacagcactgaaacccaaagagctgcacctggccatg
ggattatatgaagaggcaggagatgtcttcttcaatggaatcaggaacaggcatcaggca
gtggaatattacaggggaggagctatacctttggccaggaaattgagagacccacaaacg
gagttgagagtgttcaacaagctagctgaactccaaatcgggctccacaattatgaaaat
gctttggaatttgctaccctggcagtcagactcagtgtggatgtaggagatcatttgcaa
gaattggttgcctttcatcggctggcaactgtgtattaccttctgcaaatgtatgagatg
gctgaagactgttacctgaggacgctctctttgcattcaccagaattgcaaggggttcaa
gaagccatatattactccagggtttactaccggctaggagatctcactctccacaaatta
aaggatgagcaagatgcagccagttacttcttcttggccttggctgctaccactgaattt
gatgaccgcaattggcaaggcaagatccaagccaggctggctcaaatatttactaattcc
caaacaaataagagcccaagagggtggacaacatatcgggcccgatggttaagtgaagga
agacatgatgtatga
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