Thamnophis sirtalis (common garter snake): 106547848
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Entry
106547848 CDS
T06107
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3-like
KO
K12490
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106547848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106547848
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
106547848
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
106547848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
ArfGap
RT_RNaseH_2
RT_RNaseH
PH
SAM_1
SAM_2
RVT_1
PH_6
PH_8
PH_11
RA
PH_3
DNA_pol_viral_C
Sharpin_PH
Motif
Other DBs
NCBI-GeneID:
106547848
NCBI-ProteinID:
XP_013920589
UniProt:
A0A6I9XWN1
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MDSDIADWLAIIHLESYQDTFKQHGYVLVRDVTSLCKEDLWKLGITATGHRKRILNLVQQ
THLFVDNKTGHMAEDSHSAECTYFPDKPVIKNEEMLAKTISDSEVGHDSASQLQYSLLNK
ESHPIGKPVPKPRTVSPRDHGTAKLQPVSLSMLLPVHKPTFCSAQGAQHNIQERFDQEKC
TTSVRTFDTTSKDQVHTPASQKEATEDNSGTDIRTFVHIDEMSTEGNHLSKTLSIFSIPK
FSSLCNGQSMDISPTTSVSTAKKMQAETVLVPSDLIRSASLENKKEMVPDVTFPLPVKRV
EMKESLRGGTSTQHSEIMLQNGNFNMKKTDSLGQLCLCSQYSSEEPHSNSNAVDDFISPY
CESLFGHWWPTQGQNSATSECQDYEDVRKYVTNQSQDPIDRNPRREDKSPSAKKEAGIIS
CIAQNETEGASTVEASTDFKSFNSSPFRLSDPICSVENYDDLTISPYASYTSLSEQPLFV
ISGWLDKLSPQGNYVFQRRFVRFDGKNLMYFNNEKEPYPKGLIPLYIIDMVRSTKDNKFQ
VITKHRIFVFRAESEAQRNEWCSTLQQKVIDKQNLCSPTCSSTHLQKRGYLELKGYKSKL
FVILILSEMWLYKREEFFKMGVAICLIDMHHSSIRDAKGRNFELITPCKIFSFGAKSDQE
KQEWMEVLQNSIAETLYDYEVAEKIWSNKANRFCADCHALNPDWASINLCVVICKHCAGL
HRSLGSRISKVQSLKLDTSIWSNEMVQLFIMLGNRQANKFWAAHLPASEALYPDSNAEQR
RDFIMYKYCYGYFRMPHPQYNSQESILQALCAAVSGPGLLKKMVNFFASTMEVEMGGSCV
IWKTEPWSSSVHTHHSEGIYNEILQPVVHCGYLYKVPTTSKAIKRSRDEFQRIWCSLEKC
FLFYETERNPEPTGKIEVADMISLAVNKTDMLDIPSCTDRFCFMLELYLSNERMQQWVGD
DSSNLQSWASAIGKWFTPLSCHCLLGYEFQRVGKLCYKSMIKPNQWLQGFFILQKFHLFI
CPEEEGAIEDSINLRQLQELSIVPLAEDPEKKQMLVLVEMGLQHEGIYRKNGAKSRIHIL
MEEFRRDARNVKLHISNNFVEDVTDVLKRFFRELEDTIFTTSLHPQWNRATEISQKPQRL
ERYKELMNCLPHLNRRTLAALISHLYRVQKCVNLNHMSTKNLALLFAPSLFQTNGKGEQE
VKVIEDLIDNYVHIFNIDEDQLLQMDLENSLITTWQDVKLSQAGDIILEVYLEQKNPDYC
VTLKVSPKMRAEELTNQVLKMRNVTASRDLWLTFEILENGELGTEYTVPARHSAKQLERR
RGVMECRRWHRSPCSHAVQAAISNLVQSLIERLLHELPGMVPYFDDVLIGAHSRSGLIEV
LRKVLNHFRDTGLKLKHSKCSFAVQQVEFLGFLVDAQGIYPTPSKLEAIRNASTPTSKVE
LQAFLGLLNFYMPFLPHKALLAEPLHRLLDRSVAWCWGSHEAHAFAAVKAMLTSAAVLIQ
YSDKLLLTLACDASPFGVGAVLSHVLPNGSEAPIAFYSWTLFSTKRNYIQIDKEALDAVS
GFKKFHDYLYGWHFTLFTDHKPLLGLLAGDHPIPPILSPRMSWSSSQCIHISCSTIRAC
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatattgcagactggcttgccatcattcatctggaaagctatcaagatact
ttcaaacaacatggatatgtcttagtgagagatgtgacctctctctgtaaggaggaccta
tggaaacttggcatcactgctacaggccaccgtaaaaggattctgaatttagtacagcaa
actcatctgtttgtggacaacaaaactgggcatatggcagaagattcccattcagctgaa
tgtacatattttccagacaaacctgtgataaaaaatgaagaaatgttggcaaaaactatt
tctgattctgaggttggtcatgattcagccagccagctccaatattcacttcttaataaa
gagtctcatcctataggaaagccagtacctaagcccagaactgtatccccacgtgatcat
ggaacagccaaactacagccagtctcattgtcaatgttgttacctgttcataaacccact
ttttgttctgcacaaggagcacaacataatattcaagagagatttgaccaagaaaaatgt
accacaagtgttcggacttttgatacaacctctaaagaccaagtccatactccagcttct
cagaaagaagcaacagaagataattctggaactgatattcgaacctttgttcacatcgat
gaaatgagtactgaaggaaaccatttgtctaaaactttgtccattttttctattcccaaa
ttttccagtctgtgtaatggccagtctatggacattagtccaaccacatccgtttcaact
gctaagaagatgcaggcagagactgtattagttccttctgacctcatccggtcagcctcc
ctggagaataagaaagagatggtaccagatgttacttttcctttgccagttaaaagagta
gaaatgaaggagagtctgagaggtgggactagcacacaacattctgaaataatgctacaa
aatggaaattttaacatgaagaagactgactccctgggacaattgtgcttgtgttcgcaa
tattcatctgaagaacctcacagcaattcaaatgctgttgacgacttcatcagtccctat
tgtgagagtctgtttggacattggtggcccacccagggacagaattcagcaacttctgaa
tgccaagactatgaagatgtgcgaaaatatgtaacaaaccagagccaggacccaattgac
agaaatcccaggagagaagataagagtccatctgctaagaaggaagctggtatcatcagc
tgcattgctcagaatgagactgagggagcctctaccgtggaagcttcaacagacttcaaa
agcttcaacagttccccattcaggctctctgatcctatatgttctgttgaaaattatgat
gatttgaccatctctccctatgccagctacacctctttgtcagagcaaccactctttgtt
atcagtggctggctggacaagctctctccacaggggaattatgtcttccaacgacgtttt
gtcagatttgatggaaaaaacctcatgtattttaacaatgagaaggaaccgtatccgaaa
ggattgattcctctctatattattgacatggtgcgctccactaaggacaacaaattccaa
gtcatcactaaacacaggatttttgtcttccgagctgaaagtgaagcccagcggaatgaa
tggtgcagcactcttcagcagaaagtcatcgacaagcaaaatctttgttccccaacatgc
agcagcacacatctccaaaagcgtggttatttagaactcaaaggctataaatccaaactc
tttgtaattctcatcctgagtgagatgtggctgtacaaaagagaggaattctttaaaatg
ggcgttgccatctgtctgattgacatgcaccactcttctatccgagatgctaaaggccgt
aattttgaactcatcactccatgcaagattttcagttttggagccaagtctgaccaagag
aagcaagaatggatggaagtgcttcagaactctattgctgagactttgtatgattatgag
gtagccgagaagatctggtctaacaaagctaacagattctgtgctgactgccatgcacta
aaccctgactgggcttccatcaatttgtgtgtggtgatctgcaagcactgtgcaggtttg
catcggagcctgggttctaggatttctaaggtgcagagtctgaagctggacacgagtatt
tggagcaatgagatggtccagctgttcatcatgctaggcaataggcaagcaaacaaattt
tgggctgcacacctcccagcttctgaagccttgtatcctgattctaacgctgagcagaga
cgagatttcatcatgtataaatattgctatggatacttccgcatgccgcaccctcaatat
aacagtcaagaaagcattctgcaggctctatgtgcagctgtgtctgggccaggattactt
aaaaaaatggtgaatttttttgcaagtaccatggaagttgaaatgggaggtagctgtgtt
atttggaaaactgagccctggtccagcagtgtgcatactcatcattcagaaggaatctac
aatgagatcctacaaccagttgtccattgtggctacttatacaaagtcccaaccaccagc
aaagcaatcaagagaagcagagatgagtttcagaggatctggtgctcactggaaaaatgt
ttcctcttctatgagactgaaagaaatcctgaaccaacaggaaagattgaagtggcagat
atgatttccttagcagtgaacaaaacagacatgttggatattcctagctgcacagacagg
ttttgcttcatgctagaactgtatctgagcaatgaacgaatgcagcagtgggtaggtgat
gattccagtaatctacagtcttgggccagtgctattggcaagtggttcacccctctcagt
tgtcactgtctgctgggctatgaattccaaagggtaggtaaactctgctacaaatcaatg
ataaaacccaatcagtggttgcaaggtttcttcatcctccagaagtttcacctcttcatt
tgcccagaagaagagggagcaattgaggacagcatcaatctaaggcagcttcaagaactc
agtattgttcctcttgcggaggatccagagaaaaaacagatgctggtcctggtagaaatg
gggttacagcatgaaggtatttatcggaagaatggagcaaaatctcgtatccacattttg
atggaggagttccgacgagatgcaagaaatgtcaaattgcatatcagtaacaatttcgtt
gaagatgtgacagatgtgttgaagagattttttcgggagcttgaggatactatcttcact
acatctttacatccgcagtggaatagagccacagaaatttcccagaagccccagcgcctg
gagagatacaaggagctaatgaactgcttgccccatctcaaccgcagaactttggctgct
ttgattagccacttgtatcgggtacagaaatgtgtcaacctcaatcacatgagcaccaag
aacctagctttactatttgctcccagtctcttccagacaaatggaaaaggggaacaagaa
gtcaaggtgatagaagatttgattgacaactatgttcatatttttaatattgatgaagac
cagttgttacagatggacttggagaatagtttgattactacctggcaggatgtgaagctc
tcacaggctggtgatatcatcttggaagtatatctggagcagaagaatcctgactattgt
gttactctcaaggtttctcccaagatgagagcagaagaactaacaaatcaagtgcttaag
atgagaaatgtaacagctagtcgagatctttggctgacctttgaaattttagaaaatgga
gagctaggcactgagtacacagtgcctgcgcgacactctgccaagcagctggagcgtcgc
agaggtgtcatggagtgtcgcaggtggcaccgttctccctgcagccatgccgtacaagcc
gccatcagcaacctggtccagagcctcatagagcgattgctccatgagcttcctggtatg
gttccctactttgatgatgtcctgatcggtgcccacagtcgatcagggctcatcgaagtt
cttcggaaggtcctcaaccatttcagggacacgggcttaaaattaaagcacagcaaatgc
tcctttgctgtgcaacaggtggaattcctaggcttccttgtggacgcccagggcatctac
cccaccccctccaaacttgaagccatcaggaacgcctccactcctacctccaaagtggag
ctgcaggcattccttggcctcttgaatttctatatgccatttttacctcacaaggcatta
ctagctgagccacttcatcggttgctcgaccgatcagtggcctggtgctggggcagccat
gaagcacatgcattcgcggctgtcaaagccatgcttacatcagcggctgtcctaatccaa
tatagtgacaagctactgctgacgttggcatgtgatgcctccccttttggtgtgggggct
gttctgagccatgtcctccccaatggctctgaagcccccatagctttttactcctggaca
ctcttctccaccaagaggaattacatccagatcgacaaggaggctctggatgctgtgtcc
gggtttaaaaagttccatgattatctatatggatggcattttaccttgttcactgaccac
aagcctctccttggacttctggccggtgaccatcctatcccacctatcctgtctcctcgg
atgtcctggagttcttcacagtgtattcatataagctgcagtaccatccgggcatgctga
DBGET
integrated database retrieval system