Thamnophis sirtalis (common garter snake): 106547977
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Entry
106547977 CDS
T06107
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106547977 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106547977 (NHLRC1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106547977 (NHLRC1)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106547977 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
Baculo_IE-1
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
Prok-RING_4
zf-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
106547977
NCBI-ProteinID:
XP_013920737
UniProt:
A0A6I9Y1F5
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MTAKAADQTEIMTELLDQSENNLLECKVCFENFNPEKKHRPKNLPCGHVMCLECVMSLAH
PRNSRLECPFCRRACKASETSDCLPLLHLMEILNPSANRTPVVGKTVGRKEAVAAPGSQL
FTFHLSFGGWGTLINPTGLAVCQSSSCLAVAHDGKKRIKLFSFSGSCIQQFGERGQSGND
LRYPTDVAVTLDGHIVVTDSGDRSVKVFDCDGRGKMVIAESFSLPWGLDTLPQDDILMTD
SEAGALYRLSADFKNGELKGVKKLYSNLCYPRKVAASPVSGAIAVIEHLMARGPCYGNTR
LKIFNRDLQLIGQVDSFGLSLVFPSKVHASAVTFSREGQVIVTDAYNQAVFSLGKPEEFP
MCTPLITQGLSYPLALTFISDNSLVILDGGDHSLKIYALS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaaagccgctgatcaaacagaaatcatgacagagctgctggatcagtctgag
aacaatctgctcgaatgcaaagtatgcttcgaaaattttaaccccgagaaaaagcatcgg
ccgaagaacttgccatgcgggcatgtgatgtgcctggagtgtgtcatgtctctggcccac
cctcggaattccaggctggagtgccctttctgtcgaagggcttgcaaagcttcagagact
agcgactgcttgccgttgttgcacctgatggaaatcttgaatccttcagccaaccggact
ccggttgttgggaagacagtagggagaaaggaggctgtggctgcccctggatctcagctc
ttcacctttcacctttctttcggaggctgggggacgctgatcaaccccacggggctggct
gtgtgtcagagctccagctgtttagccgtggcccacgatggcaagaagcgaatcaagctg
ttcagcttcagtggcagctgcatacagcagtttggagaaagagggcaatccggaaatgac
ctcaggtacccgactgatgtcgcagtcacgctggacggtcacattgtggtcacagatagc
ggggatcgttcggtcaaagtgttcgattgtgacggcagaggcaaaatggtcatcgcggag
tccttttccttgccgtggggccttgacaccctgccccaagacgacatcctcatgaccgat
tcggaggcaggtgctctgtaccgcttgtcggctgactttaaaaatggagaattaaaggga
gtgaagaagttgtattctaacctgtgttatccgaggaaagtggctgcttcgcccgtctct
ggagccatcgctgtcatcgaacacttgatggccagagggccctgctacggcaataccagg
ctgaaaatcttcaacagagacttgcaactaatcggtcaggtggacagttttggcctgagt
cttgtcttcccttccaaagtccacgccagtgctgtgacctttagcagggaagggcaagta
atagtaacggatgcttataaccaagccgttttctctcttggaaaacccgaagaattccct
atgtgtacaccactgataactcagggactttcctaccctttggcattaactttcatatca
gataattctctagtcattttagacgggggcgatcattctttaaaaatatatgctctcagc
taa
DBGET
integrated database retrieval system
