KEGG   Thamnophis sirtalis (common garter snake): 106547982
Entry
106547982         CDS       T06107                                 
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
  KO
K15009  SH3 and multiple ankyrin repeat domains protein
Organism
tsr  Thamnophis sirtalis (common garter snake)
SSDB
Motif
Pfam: Ank_2 Ank SAM_1 Ank_4 Ank_5 SAM_2 SH3_2 PDZ_6 PDZ SH3_1 SH3_9 FERM_f0 SAM_PNT
Other DBs
NCBI-GeneID: 106547982
NCBI-ProteinID: XP_013920747
UniProt: A0A6I9Y1G3
LinkDB
Position
Unknown
AA seq 1856 aa
MPQSPESSAEEEEHFSQCPEGESGSESSHEGPSPPASPANPAHNCSMSVPEDAHFSMMVF
RIGIPDLHQTKCLRFNPDAAIWVAKQQILCTLNESLKDVLNYGLFQPATNGRDAKFLDEE
RLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQHGAAEKV
ARLLDKGLDPNYHDSDTGETPLTLAAQLDGTIDVIRLLCLGGAHIDFRARDGATALHRAV
CSHHYSALMALLDLGGSPNYKDRRGLTPLYHTAMVGGDPHCCELLLYNRAYIGTTDENGW
QEIHQACQHGNSQHLEHLLFYGAEPGAQNASGNTALHICALYNKESCARILLYRGANKEI
KNNHGQTAFQVAVIAGNFELGELIKSHRDSDVVPFQETPQYASRRRDGPQNLTVPHTLLR
ANSDTSMNLPDWMLYAQPSIPPATVAVQGQKITTGTLRSSSSPRGARSRSPSRGRHTDEA
KKQRGRPSSSGYQKESAGSSTLSSRGVKRKLYSAVPGRTFMAVKPYQSQGEGELSISKGE
KIKVLSVGEGGFWEGQVKGRVGWFPSDCVEEVPNKSQEGKQESRSDKAKRLFRHYTVGSY
DSFDAPSDYIIKEKTVLLQKKDNEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEG
GVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNNLMVKVVMVTRNPEMEEAMRK
KAAPQQTRRLPPPAISLRSKSMTSELEEMVEKVSPWKKKTDYEPAMGTDKKRTVYQMALN
KLDEILAAAQQTISVGDGCGSGGLPSLGKTRGTTKNYFSSEPSFEQHRLGQASYERPSYL
PSSHPPGMMLRQKSIGAAEDEKPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPDPPYSST
SPSASGRVTPSARSTFNPSTEAKLYSTSLHQDPPYEPPSRVRDKMSLYRQESEQGAEGST
ARGWRGHTPDLRYYNLPPRATSTAMYVPTKPMRRKGPLVKQTKVEDEQRQQQGTPSSQMQ
ASSLPSQSSTQSEKSSIPIPTIIIKAPSTSSSGRSSQGSSMEAETQPEPVVPVPSLQLHN
SMDFTSQFGAALVGAARRDREWYSEARRKSALFLSTEQPDDESQQMPVPRLRHSKSIDEG
MFSSEPYIQLNMASGFGSSSGGGSSPSYLQSRSAKTYGASTTSAFTSVCSSFLPQLQTHS
TPLIHPLTGKILDPGSPLGLALVARERALKESQSQQESREERHSRPSSPRFGETPKTPES
PSSSILRLWETSEQQTHHQLPASSRKEQEGHQPEHQPSPISARTTSWEKRPEEGEKLELH
VRFVENCRPTEEEEEEEEEEESSQESGKVEMAAPPMERASEENGLPLLVLPPPAPSIDVD
DEFVFSEPLPPPIEFSNSFDKPESPPKAASELPPAVAPPAAPPAPATLDSTASSLTSYDS
EVATLTQAGTAETKESPHVNFSSVVSSIAIPAAEAPEAVTDSGIEEVDSRSSSDHHLETI
SSVSTLSSMSGEGTELLDTYITYLDGQAFGGSSSGGGGVSGGSGGGSIEKNPLQTKLRSR
PFPGRLPVATPTSSTISVSACSENMFALTPAPPYHQQPAAVDPGKELPQKSPLPWEEPKA
SAMSTVKASIISELSTKLQQMGGVSWSRPPDAVAPFGSERPSSLQRQRLPDETSPSLISS
KPVSSLFHNWPKSPQGKHPKSVDFDIRPALRRAPSPAALPSEHKISPTPRPSSLPILPSV
PIYTGVFDLRGSPTSGGEHPFPSFPSGSRSLSPTHFLPPATDKPFGSKPLPFWTKYDVAD
WLEYLKLGEHRDRFLDNEIDGSHLPSLTKEDFIDLGVTRVGHRMNIARALKFFLER
NT seq 5571 nt   +upstreamnt  +downstreamnt
atgccccagagccccgaatcaagtgcggaggaggaggagcacttctcccagtgccccgag
ggggagtcgggctcggagagctcccacgaggggcccagccccccagccagtcctgctaac
cctgcccacaattgctccatgtcagtacctgaagacgctcacttcagtatgatggtcttc
cgaattggtattcctgatttgcaccagacgaaatgcctacgtttcaaccctgatgcagct
atttgggtggcaaaacaacaaattctctgcaccctcaacgaaagcctcaaggatgttcta
aattatggactcttccagccagccaccaatggccgggatgcgaaattcctagatgaagag
cgactcttgcgcgagtacccacagagttttgaaaagggggtaccctatcttgagttccgc
tacaagacacgagtgtacaagcaaaccaaccttgatgagaagcagctagcaaaacttcac
acaaagacgggtttgaagaagttcctggaatatgtgcaacatggagcagctgaaaaagtg
gcacggctcttggacaaagggctcgatccaaactatcatgattctgataccggtgaaaca
cctttgacgttggctgcccaattagatgggaccattgatgtgatccggctactgtgcctt
ggcggtgcccacatagatttccgggcaagagatggagccacagcacttcacagagctgtc
tgttctcaccactattcggccctcatggcactcttggacctgggtggctcccccaattat
aaggaccgccgtggactgaccccactctaccatacagctatggttggaggtgacccacac
tgctgtgaacttctgctatacaatcgagcctacattggcaccactgatgagaatggctgg
caagaaatacaccaggcttgccaacatggaaactcccagcatttggaacacctgcttttt
tatggtgctgagccaggtgcacagaacgcatccgggaatacagcattgcacatctgtgca
ctctacaacaaggaaagctgtgcccgaatcctgttataccgaggagctaacaaagagatc
aagaacaaccatggtcaaactgccttccaggttgcagtcattgcaggaaattttgagttg
ggggagctgatcaaaagccatcgagattcagatgtagtcccttttcaggagactccccaa
tatgccagccggcgccgcgatggccctcagaaccttaccgtgccacatactttgctgcga
gccaacagtgataccagcatgaacctcccagactggatgctttatgcccagccatctatc
ccacctgccacagttgcagtccagggccagaagatcaccacaggaacattgcgcagttct
agcagtccccgtggtgctcgcagtcgctcgccatcacggggacggcacacagatgaggcc
aaaaaacagcgtggtcggcccagttcaagtggctaccagaaagaatctgctggaagcagt
acactgagtagtcgaggtgtgaagcggaaactttattcggctgtgcctggccgcacattc
atggctgtgaaaccctaccaaagccagggtgagggtgagctctccatcagcaagggcgag
aagatcaaggtgctgagtgttggggaaggcggcttctgggagggacaggtaaagggtcgt
gtaggctggttcccctcagactgcgtggaggaagtgcccaacaagtcccaggaagggaag
caagagagccgcagcgataaagccaaacgtctcttcagacactacacagttggttcctat
gacagctttgatgcccctagtgattacatcattaaagagaagacagtgctgcttcagaag
aaggacaacgaaggatttggctttgtgctaagaggggctaaggcgcagaccccaattgag
gagttcactcccacacctgcttttcctgctctacagtacctggaatcagtggatgaagga
ggtgtggcttggcgagctggtctccgcatgggtgattttctcattgaggtaaatggacaa
aatgtggtaaaagttggtcataggcaagttgtcaatatgattcgacaagggggcaacaac
ttgatggtgaaagttgtcatggtaacacggaatcctgagatggaggaggccatgaggaag
aaagctgcgccacagcagacaagacgattgccccctccagccatctccttgcgttccaaa
tctatgacatcggagttggaggaaatggtggagaaagtctccccttggaagaagaaaaca
gattacgagccagcgatgggcactgataagaagcggactgtctatcagatggctttgaat
aaattagatgagattctggcagcagctcaacagacaattagtgttggggatgggtgtgga
agtggagggcttccttccttggggaagacacggggcactacgaagaattatttctcctct
gagcccagttttgaacaacatcgtcttggtcaggccagttatgagcgtccatcatactta
ccgagtagccatccccctggcatgatgcttcgccagaaatctattggagcagctgaggat
gagaagccctacctcgctccccctgctatgaaattcagccgcagcctttcggtccctggt
tccgaagacattcccccacctccaaccacctcccctcctgatccaccttacagcagtacg
tcgccctctgcatctggccgagttactccttcagcccgttcaaccttcaatcccagcact
gaggccaaactgtattccacttctcttcatcaggacccaccatatgagccaccttctcgt
gtccgtgacaaaatgtctctttaccgccaagagtctgagcaaggagctgaagggtccaca
gcacgtgggtggaggggccacacccctgacctgcgatattataatttgccccctcgggca
accagcaccgccatgtatgtacccaccaagcccatgcgccgcaaaggtccattggtcaag
cagaccaaagtggaggatgagcagcgccagcagcagggtaccccctcttcccagatgcaa
gcatcgtctttaccatctcagtcatccacacagtctgaaaaaagctccatcccaataccc
accatcataattaaagctccttcaaccagcagcagtgggcgtagtagccagggaagcagc
atggaggcagagacccaacctgagcctgtggtgcctgtcccatcactgcagctgcataac
agcatggatttcaccagtcagtttggggctgccctagttggggcagcccgacgagaccgt
gaatggtacagtgaggctcgtcgcaagtctgctctctttctctccactgagcaaccagat
gacgagtctcagcagatgcctgtcccccgtctccgccattccaaatccattgatgaaggt
atgttttccagtgagccatacattcagttgaacatggcttctggctttggcagtagcagt
ggtggtgggagcagccctagctatcttcagtctcgcagcgctaaaacatatggagccagc
actaccagtgccttcacttctgtgtgttcaagtttcttgccccaactccagacccattca
actcctctcattcacccactgactggcaagattttagatcctggatcccccttgggactt
gcattagtcgcacgtgagcgggctctaaaggagtcccagtctcaacaagagagccgagaa
gagaggcactcgcgcccatcctctccccggtttggggagactcctaaaactcccgagtct
cccagcagttccatcttgcgcctctgggagacatcagagcagcagactcatcaccaactg
cctgcatcatcccggaaggagcaggaaggccaccaacctgagcatcagccctctcccatt
tcagctagaacaacttcttgggaaaaacggcctgaagaaggagagaagctggagctacat
gtgcgttttgtggagaactgccgcccaacagaggaggaggaggaggaggaagaggaggag
gagagcagccaggagagtgggaaagttgaaatggccgctcccccaatggagcgagcatca
gaagagaatggacttccactgttggtgctgcccccacctgccccttccattgatgtggat
gatgaatttgtcttttcagagccacttcctccacccatcgagttctccaatagctttgat
aaacctgagtctccccccaaagctgctagtgaactgcccccagcagtagcccctccagcc
gctccacctgcccctgccaccttagattctacagcatccagcctgacctcctatgacagt
gaggtggccaccttaacccaagctggtacagcagaaaccaaggaatctcctcatgttaac
ttttcttccgttgtctcatccattgccatcccagcagcagaagcacctgaagcagtaact
gactcgggaattgaggaggtggacagtcggagtagcagtgatcatcacttagagactatc
agcagtgtctcaacgctgtccagcatgtctggggaaggcacggaactcttggacacttac
atcacctacttggacggtcaggcttttggggggagcagcagcggtggtggtggagtaagt
ggcggcagtggtggcggcagcatagagaagaatccactgcagaccaaactacgctcccgg
ccatttccaggccgcttgccggtggctacccctaccagctccaccatttcagtttcggca
tgttctgaaaacatgtttgccctcacacctgctcctccataccaccagcagccagcagct
gttgatcctggcaaggagctgccgcagaaatctccactgccgtgggaagagcctaaggca
tcggccatgtccaccgtgaaagctagcatcattagtgagctgagcaccaagctgcagcag
atgggcggggtttcgtggtcacgaccacctgatgctgtggctccctttggttccgagaga
cccagctccctgcagaggcaaaggctcccagatgagacatccccatcattgatttcctcc
aagcctgtaagcagtcttttccacaactggcctaagtccccccagggcaagcatcccaaa
agtgtggactttgacatccgtcctgctctgcgacgggccccgagtccagctgccctgccc
agtgagcacaagattagccccaccccaaggccttcctctcttcccatcctgccttctgtg
cccatctatactggcgtctttgacctccgtggttcacccacatctgggggtgaacatccc
ttccctagcttcccttcaggcagccgttctctgtcccctacccacttcctgcctccagcc
acggacaagccgtttggctccaagccactgcctttctggactaaatacgatgtggctgat
tggctggagtatctgaagttgggggaacaccgcgatcgattcctggacaacgaaatcgat
ggatctcatctgccttcgctcactaaggaagatttcattgacctgggcgtgacgcgagtt
gggcatcgcatgaacatcgcccgtgccctcaagttctttctggagaggtga

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