Thamnophis sirtalis (common garter snake): 106548032
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Entry
106548032 CDS
T06107
Symbol
NR1H2
Name
(RefSeq) oxysterols receptor LXR-beta
KO
K08535
liver X receptor beta
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106548032 (NR1H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106548032 (NR1H2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tsr03310
]
106548032 (NR1H2)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106548032 (NR1H2)
Nuclear receptors [BR:
tsr03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
106548032 (NR1H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106548032
NCBI-ProteinID:
XP_013920824
UniProt:
A0A6I9YAQ4
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All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MAKTGTDEPQLSQETDCGEPTSQIKNEWSVAKAESQNTVKIEVICTDDGESSTHSTAEEP
ARKRKKGPAPKMLGDEVCSVCGDKASGFHYNVLSCEGCKGFFRRSLIKGAQYTCKGSGQC
HMDMYMRRKCQECRLKKCRQAGMREECVLSEEQIRKKKISKHESDGVPAGERDGGEVLRV
PPLLCDPALSQPEPVPLTPQQEGMIQQLVAAQQQCNKRSFSDQPKVTPWPMSSDPNSREA
RQQRFAHFTELAIISVQEIVDFAKQVPGFLQLSREDQIALLKASTIEIMLLETARRYNHE
TQCITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRELQLDDAEYALLIAINIFSADR
PNVQDHGLVEALQQPYIEALSSYIHLNRPQDHLMFPRMLMKLVSLRTLSSVHSEQVFALR
LQDKKLPPLLSEIWDVHE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacaggcaccgatgaacctcagttatcacaagaaacagactgtggggagccc
acttcacagatcaaaaatgaatggtcagtggcaaaggcagagtctcagaacacagtgaaa
attgaagtaatttgcacagatgatggcgaaagttctacgcacagcactgctgaggagcca
gcccgcaaacgcaaaaagggacctgcccccaagatgttgggggacgaagtctgcagcgta
tgtggggacaaggcctcgggttttcactataatgtcctgagttgtgagggttgtaagggc
ttcttccggcgcagcctcatcaaaggagctcagtatacctgcaaaggcagtggccagtgc
cacatggacatgtacatgcgccggaagtgccaggaatgccggttgaaaaaatgccgacaa
gcaggcatgcgggaagaatgtgtcctttcagaagagcaaatccgcaagaagaaaatctct
aagcacgagagtgatggggttccagctggggagagagatggaggcgaagtacttcgagta
cctccattgctctgtgatcctgctttatctcagcctgagccggttcctcttaccccacag
caggagggcatgatccaacagttggtggcggcccaacagcagtgtaacaagaggagcttt
agtgatcagcccaaagtcacaccctggccaatgagcagtgaccccaacagccgggaggct
cgccagcagcgctttgcccattttacagaattagccatcatctcagtgcaagagatcgta
gactttgccaagcaagtacccggcttcctgcagctctcacgggaagaccaaatcgcactg
ctaaaggcttctaccattgagatcatgttattagagacagcccggcgctataatcatgag
actcagtgcattacatttcttaaagattttacttacagcaaggatgactttcatcgtgca
ggtcttcaggtagaattcatcaaccccatatttgagttttctcgggccatgcgagagttg
cagctggatgatgccgaatatgccctcctcattgcgatcaacatcttctctgctgacagg
ccgaatgtacaggaccatggcctggtagaggctttgcagcagccctatattgaggccctt
agttcttacatccacctcaatcgtccacaggaccacctgatgttcccccgcatgctgatg
aagctggtgagcctgcggacattgagcagcgtgcactcagagcaggtctttgctttgcgc
cttcaagataagaagcttccgccacttctgtctgagatctgggacgtccatgaatag
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