Thamnophis sirtalis (common garter snake): 106548064
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Entry
106548064 CDS
T06107
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106548064 (GEMIN5)
03041 Spliceosome [BR:
tsr03041
]
106548064 (GEMIN5)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106548064 (GEMIN5)
mRNA cycle factors
P-body specific factors
106548064 (GEMIN5)
Spliceosome [BR:
tsr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
106548064 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
MIOS_WD40
NBCH_WD40
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_IP5PC_F
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
106548064
NCBI-ProteinID:
XP_013920851
UniProt:
A0A6I9Y2P5
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
QLGEAGSTRSAAPAPNAAAAIVRVARERRRSRCALRRLPAAVTFYGELIGHTERVSGFTF
CPYPGQNYYCASSSDDGAVKIWNVQTLAVMMEHTLHQNTISALHWSPKAKDLIVSGDEKG
IVICYWHNRNDSQQFFPEPRTIFCLTCSPHHENLIAIGYKDGIVIVMDISKKGEIVHRLR
GHDDEIHSLAWCPVLGEDAPFSKQDFQEEDAITGAITEEAGVEKGYYLASGSKDQSIRVW
SCNTNRVVVSYKLPFLKRRGGSVEPMVKERIWLTLHWPSNQPTCILSSCFGGELLKWDLT
QPGKRKWELLGASSEGQNHSRIVFNLCTLQIEDRQLLFSISMDRDVKCWDLATSNCCWTM
PSLGGFVYSLAFSPVDTGCLAIGVGDSMLRVWNTMSINNHYDVKTFWQGIKSKVTALAWH
PTKEGCLAFGTDDGKVGIYDTYSNKPPQVSSTYHKKTVYTLVWGPPVPPLSLRGDGDRPS
ITLYSCAGEGVVFQHNPWNLNGEAHDINKLIRETNSIKHKLPAHTEISWKPDGTLLAIGN
EDGSIEIFQAPHLKLLCTIQQHHKLINVIRWHHDHGAQPELSSMIASGSNNATIYVHNIK
NVIESAPEKPIIITEPFRTLAGHTAKITSLSWSPHHDGRLVSVCYDGTAQVWDALKEEPL
HNYRGHRGRLLCAQWSPVETESIYTGADDFSVHKWVALKQEHIRPPQGKKSIELEKKRST
QIKQKMKKKKKPLGKLSSAQNTNEWMNVGENMKDSPLEENEVSDPEGEKEQHEQEAAEKI
SIEVDSDSTTCPPSVHGSDSLKPSVLVKAPPIRKDPVKPGVDISVKRKKPRSILPLSTSM
DHRSKEELHQDCLRLAHFLHSKELNEDLTSSSKDPVHLGLFTDRPALYKMMETEGKSHLG
NGHPELFQQLMLWKGDLRGALQSAAERGELTDQLVAISPMAGYQAWTSTVEAFAKQLCFQ
EQYVKASSYLLSLHKVYEAVELLKSHNFFREATVIAKARLHPEDPVLKDLYICWAAVLEK
DGHYSMAAKCYLGATSPYDAAKVLAKKGDITSLKTAAELALIVGENDLSLSFSLRCAQEL
LSSRNWVGAQEVLQQHESLLGQRLVFCLHELLHKCLSQQNPVGTRCQSTPCYNSWTTNQD
LHFIEMVINVWQSALGVNTAEQFQNTFEQLRTLEYPPATSNTPPKQLMFHISHELTLAFL
SLQMSSWEETVKATLRAVMRSYDAGNFNLMQEICNLCFPTVGCNHVRDHLDSRNPESMAA
FRSLEAFVAYGQLYNLWWNSPENAGLESLKQTSEAHSPTTLERNSINTACLTEETVLKPT
KTKYPFYVDSNGVASESDLADHFSLEDRKMKLRGCRVLLSEEHAEVQSLQRDISTVQQIF
AEMIHEHQKTNLHQSAEGKELEAKSAINQNLNEEQRKELVSLPDLTKQLTEANQKLAEFP
ESMKVSPFPDVLECCLIVLHMGAQCQVDLIPELQEQSLNLLGKYGRNQIYKEASKKFFI
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
cagttaggggaagccggcagcacgcgctcggcggctccagcgcccaacgccgccgctgcc
atagttcgagtggcgagggagcgtcgccgctcacgttgcgctttaaggaggctcccggcc
gctgtcaccttttatggagaattaataggccacactgaaagagtttctggcttcacattt
tgcccctaccctgggcaaaactactattgtgctagcagctctgatgatggagctgtgaaa
atttggaatgttcaaacgttggctgtcatgatggaacatacactacatcagaatacaatt
tctgcattgcattggtcacccaaagcaaaagatctaattgtgtcaggtgatgagaagggg
atagtaatttgttactggcataatcgaaatgacagtcagcaattttttccagaacctaga
actatattctgtctcacttgttctcctcaccatgaaaatctgatagctattggctataag
gatgggattgtgattgttatggacatcagcaaaaagggagagattgttcatcgcctgaga
ggtcatgatgatgaaatacattctttggcatggtgccctgtgcttggggaagatgctcca
ttcagtaaacaagatttccaagaagaagatgccattacaggagccataacagaagaagca
ggtgtagaaaaaggctattatttggcctcaggaagcaaagatcagagcattcgtgtatgg
agctgtaacacaaacagagtggtagtgagctacaaattgccctttttgaaaagaagaggt
ggaagtgttgaaccaatggtcaaagagcgtatttggttaacactacactggccctcaaat
cagcccacatgcattctctccagttgctttggtggtgaattgctgaagtgggatttaacc
caacctgggaagcggaaatgggaactcctgggggcttcatctgaaggacaaaatcattct
agaatagtcttcaacttgtgtactttgcaaatagaagacagacagcttcttttttccatt
tcaatggacagagatgtgaagtgttgggatctggcaacttcaaattgctgttggactatg
ccttctcttggggggtttgtttacagcctggccttttcacctgtagatacaggctgcctt
gctattggagttggggacagcatgctccgagtgtggaacaccatgtcaattaataatcat
tatgatgtgaaaactttctggcagggcattaaatccaaagtcacagctttggcttggcat
ccaacaaaggaaggctgcttagcttttggaacagatgatggaaaagttggaatttatgat
acctactctaacaagcctccacaagtctctagcacataccataagaaaactgtgtatact
ttagtttggggacctccagttcctccactgtctttacggggagacggtgatagaccttcc
ataaccttatatagctgcgcgggagaaggagttgttttccagcataatccttggaatcta
aatggagaagctcatgatatcaacaaactcattcgggaaacaaattcaatcaaacacaaa
ttaccagcacatacagaaatcagctggaaaccagacggtactctcttggctattggtaat
gaagatggatcaattgaaatatttcaggctcctcatttgaaactgctgtgcaccatccag
caacatcataaacttatcaatgttatccgttggcatcacgaccatggggcacaaccagaa
ctgagttctatgatagcttctggctcaaataatgctactatttatgtacataatatcaag
aatgtcatagagagtgctccagagaagcctataataatcacagagccttttcgtactctg
gctggacacacagccaagatcactagtttgtcttggagtccacatcatgatggaagactg
gtatctgtatgctatgatggcactgcccaggtttgggatgctctcaaagaagagcctttg
cacaattacaggggacaccgaggccgtctgctctgcgcacagtggtcacctgtggaaaca
gagtccatttacactggggctgatgacttttctgttcataaatgggtagctttaaagcaa
gagcacattcgccctccccaaggcaagaagagtattgagttagagaaaaaaagaagcact
cagattaaacagaaaatgaagaaaaagaagaaacctttggggaagttgtcttctgcacag
aatacaaatgagtggatgaatgtcggtgaaaatatgaaagactctcccttggaagaaaat
gaggtttctgacccagaaggagaaaaggaacagcacgagcaagaggcagctgagaaaatt
tccatagaagttgacagtgattcaacaacttgtccaccatctgtccatggctcggatagc
ctgaaaccttctgttttggttaaagctccacccataaggaaggatccagttaagccagga
gtggatatttctgtgaagagaaaaaagcctcggtcgatcctgcctctgagcacatctatg
gaccacaggtcaaaggaagaactgcaccaggactgtctgagattagcgcatttcttacat
tccaaagagttgaatgaagatttgacctcttcttcaaaagatcctgtccatttgggtctg
ttcacagatagacctgccctatataagatgatggaaacagaaggaaaaagtcatttagga
aatggacaccctgagctatttcaacaactcatgttgtggaaaggagatcttagaggtgct
cttcaatcagctgcagaaaggggagaactgacagatcaactagtcgccatctcaccaatg
gctggctaccaggcctggacctctactgtagaagcttttgcaaagcagttgtgttttcag
gagcagtatgtcaaggcttcctcttatctcctttctcttcacaaagtgtatgaagctgtg
gaactactgaagtctcataattttttcagagaagctactgtaattgccaaagctagatta
catcctgaagatccagttctaaaagatctgtatatctgctgggcagcagtgctagagaag
gatggccattactctatggcagccaaatgttaccttggagctacctctccctatgatgct
gcgaaagtactggctaaaaaaggagatattacttcacttaaaactgctgccgaattggct
ctgatagttggagagaacgatttatctctgtccttctccttgagatgtgcccaggagctt
ctttcatctaggaattgggttggtgcacaagaggttctccagcagcatgagagcttgttg
gggcaaaggttggtattctgtcttcatgaattgcttcacaagtgcctcagtcaacagaat
ccagtgggaactcgatgccaatccacaccttgttacaatagctggaccaccaatcaagat
ctccatttcatagaaatggttatcaatgtatggcagagtgcattgggtgtgaacacagct
gaacagtttcagaacacatttgagcagctgagaactcttgagtaccctcctgctactagc
aatacgcctcccaagcagctgatgttccacatttcccatgagttgacactagcatttctt
agccttcagatgtcttcctgggaggaaactgtgaaagctaccttaagagctgtgatgcgc
agttatgatgctggaaacttcaatcttatgcaagagatatgcaacctctgtttccctaca
gtaggctgcaatcatgtgagagaccacctggacagcagaaatcctgagagcatggcagct
ttcagaagtttagaagcatttgtggcttatggacagctatacaacctgtggtggaattcc
cctgagaatgctggcttagaatccctgaaacaaacctctgaagctcattctcctactacc
cttgaacggaacagcattaatacagcatgtttgactgaagaaactgtattgaagcccacc
aagactaaatatcctttttatgtggattccaatggagttgcctcagaatctgatttagca
gaccatttcagtttagaagacagaaagatgaaactgaggggatgtagagtgctcctttca
gaagaacatgctgaagtccagagtttacagagggatatttctacagttcaacaaattttt
gcagaaatgattcatgagcatcagaaaaccaacctccatcaaagtgctgaggggaaggaa
ttagaggctaagtctgcaataaaccagaatctgaatgaagaacaaagaaaggaactagtt
tctctgccagatctgacaaagcaacttacagaggcaaatcagaaacttgcagaatttcca
gaaagtatgaaggtttccccttttcctgatgtattagaatgctgtcttattgtgcttcac
atgggtgcacagtgccaagtggatctgattccagaattacaagagcagtcattaaatcta
cttgggaaatatggaagaaatcagatatataaagaagcttccaagaaattctttatatga
DBGET
integrated database retrieval system
