Thamnophis sirtalis (common garter snake): 106548099
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Entry
106548099 CDS
T06107
Symbol
PCDH7
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106548099 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsr01009
]
106548099 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106548099 (PCDH7)
Protein phosphatases and associated proteins [BR:
tsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106548099 (PCDH7)
Cell adhesion molecules [BR:
tsr04515
]
Cadherins
Protocadherins
106548099 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
DUF6479
Mid2
TMEM154
KIAA1549
LYRIC
T3SS_ExsE
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
106548099
NCBI-ProteinID:
XP_013920895
UniProt:
A0A6I9YAR7
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MIFDENECFLDFEVSVIGPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGT
LYLLPTATDRDFGRNGIDRYELLQGSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYE
LSLRVRDGGEPARSSQAILRVLITDVNDNSPRFEKSVYEADLAENSSPGTPILQLRAADA
DAGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLHRIDREEVSQLRFTVMARDRGQPPK
NDKATVVLTIRDENDNVPTIDIRKIGRIPLRDGVASVAEDVLVDTPIALVQVSDRDEGEN
GVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAPLDYEAVRDYNVVIVAVDSGSPS
LSSNNSLLVRVADTNDNPPIFSQPVLEVPFPENNAPGERVATVLATDADSGKNAELAYSL
EPSPLAAEAPAGLFTIDPDSGDVRVQAVLDREQRDTYEFQVTARDKGVPPLQGSALVVVR
VADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNSQLTLAIQPGAQEAAAA
GADPPGIFSIENDTGTIYSTVSFDRELQTSYTFRVKAVDGGEPALSATATVSLFVMDEND
NAPAVTSPANSSYTFLPPSSSPRVVVAAVQARDADAGQNAELTYNLVGGNPFKLFEIDPS
SGVVSLVAKLAPKHHGLHRLVVQVNDSGQPAQATTALLHVFVNESVANASAVESQVARSL
HTPLGRDIAGDPSYELTKQRLSIVVGVVAGVMAVVLLILVVVLARYCRSKGKHGGYEAGK
KDHEDFFTPQPHDKAKKPKKDRKGKKGGGKQPLYSSIVTVEASKPNGQRYDSVHEKLSAA
DSPALSRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVG
AGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESET
PSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENGEEVAFNGVALSAARGISRLGV
GQDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKPKSQPKLSTFMPVDERGSPE
KLANGEASLMGDRNRNLLNKKLTSSYETFSAASFSKSEETNPEDIPLAQTGEYKPSTINT
LTRREVYL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgacgagaacgagtgtttcctggacttcgaggtgtcggtcatcgggccctcg
caaagctgggtcgacttgttcgagggccgggtcatcatcctggacatcaatgacaacacg
ccgactttcccttccccggtgctgaccctcaccgtggaggagaaccgtccggtgggcacg
ctctacctgctccccaccgccaccgaccgcgacttcgggcgcaacggcatcgaccgctac
gagctgctgcaggggagtagcgtcttcgaactgcaggtggccgacacgcccgacggcgag
aagcagccgcagctgatcgtcaagggggctctggatcgcgagcagagggactcgtacgag
ctcagcctgcgggtgcgggacgggggcgagccggcgcggtcctcgcaggccatcctgcgc
gtgctgatcaccgacgtgaacgacaacagcccgcgcttcgagaagagcgtctacgaggcg
gacctggccgagaacagcagccccggcacgccgatcctccagctgcgggcggccgacgcc
gacgccggggtcaacggccagatcgagtacgtcttcggggccgccaccgagtcggtgagg
cgcctgctgcgcctggacgagtcgtcgggctggctcagcgtcctgcaccgcatcgaccgc
gaggaggtgagccagctgcgcttcaccgtcatggcccgggatcgcgggcagccccccaag
aacgacaaggccacggtggtgctgaccatccgcgacgagaacgacaacgtgcccaccatc
gacatccgtaagatcgggcgcatcccgctgcgcgacggggtggccagcgtggccgaggac
gtcctcgtcgatacccccatcgccctggtgcaggtctccgaccgcgacgaaggcgagaac
ggcgtggtgacctgcacagtggtgggggacgtgcccttccagctcaaaccggccagcgaa
ggggaaggcgagccgcagaacaagcgcaagtacttcctccacacctcggccccgctggac
tacgaggccgtgcgggattacaacgtggtcatcgtggccgtggactccggcagccccagc
ctctccagcaacaactccctgctggtccgggtggcggataccaacgacaacccgcccatc
ttcagccagcccgtcttggaggtgcccttcccggagaacaacgccccgggcgagcgggtg
gccaccgtcttggctaccgacgcggacagcggcaagaacgcggagttggcttactccttg
gagccctcgccgctggcggccgaggcgcccgcgggcctcttcaccatcgacccggattcc
ggcgacgtgcgggtgcaggcggtgctggatcgcgagcagcgggacacctacgagttccaa
gtcacggcccgcgataaaggggtgcccccgctgcagggctcggctttggtggtggtgcgg
gtggccgaccgcaacgacaacgagccccgcttcatgcaggacgtcttcaccttctacgtc
aaggagaacctgcagcccaacagccccgtgggcatggtgaccgtgatggacgccgacaaa
gggcgcaactcccagctcactttggccatccaacccggcgcgcaagaagccgccgccgcc
ggcgccgacccgccgggcatcttctccatcgagaacgacacgggcaccatctactccacc
gtctccttcgaccgcgagctgcaaaccagctacaccttccgcgtgaaagccgtggacggc
ggcgagccggcgctctcggccacggccaccgtctcgctcttcgtgatggacgagaacgac
aacgcgccggccgtcacctcgcccgccaacagctcctacaccttcctgcctccctccagc
agcccgcgggtggtggtggccgccgtgcaggcccgcgacgccgacgcgggccagaacgcc
gagctgacttacaacctggtgggcggcaaccctttcaaactcttcgagatcgacccttcc
agcggggtggtctcgctggtggccaagctggcccccaagcaccacggcttgcaccgcctg
gtggttcaagtcaacgacagcggccaaccggctcaagccaccacggctttgctccacgtg
ttcgtcaacgagagcgtggccaacgccagcgcggtggagagccaagtggcgcggagtttg
cacacgccgctgggccgggacatcgccggcgaccccagctacgagctgaccaagcagcgc
ctgagcatcgtggtgggagtggtggccggcgtgatggccgtggtgctgctcatcctggtg
gtggtcctggcccgctactgccgctccaagggcaagcacggcggctacgaggccggcaag
aaagaccacgaggacttcttcacgccgcagccccacgacaaggccaagaagcccaagaag
gaccgcaagggcaagaaagggggaggcaagcagcccctctacagcagcatcgtcaccgtg
gaagcctccaagcccaacgggcagcgctacgacagcgtccacgagaaactctcggccgcc
gacagcccggcgttgagccgttatcgctcggtcaacggcggcccgggcagcccggatttg
gcccggcattacaaatccagctcgcctttgcccaccgtccagcttcacccccagtcgccc
accgccgggaaaaagcaccaagccgtgcaggacctgccgccggccaacaccttcgtgggc
gcgggggacaacatctccatcgggtcggaccactgctcggagtacagctgtcaggccagc
agcaagtacagcaagcagccgttccgtagagtgacgttttcagttgtgagtcagcctcaa
gacccacatcaagggtctttgcagagttgctatgacagcggtctggaagagtctgaaacg
ccaagcagtaagagttcttcaggcccaaggctgggtgcccttccactcccagaggacaac
tacgaaaggacaacgccggatggcagtgttggtgaggcagagcatatggaaaatggggaa
gaagtagccttcaatggtgtggctttaagtgctgctagagggatatcccgattgggggtc
ggccaagattcaagacctctgccagatgttgccctgacgggaaagtgcacccgggaatgc
gatgagtatggccactctgattcttgttggatgcccgtccgcacttcacccgaaaggaag
ccgaaaagccagcccaaactctctacgttcatgcctgtcgatgaacggggcagtccggag
aagctggccaacggagaggcctccctgatgggcgatcgcaacaggaacctcctgaacaaa
aagttgacctcatcttatgagaccttcagtgcagctagcttcagcaaaagcgaagaaacc
aacccagaggatattcccctggcacagacaggggaatacaagccatctactatcaatact
ttaactcgaagggaagtttacctctag
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integrated database retrieval system
