Thamnophis sirtalis (common garter snake): 106548185
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Entry
106548185 CDS
T06107
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_At5g56370
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
106548185
NCBI-ProteinID:
XP_013920992
UniProt:
A0A6I9Y1Y1
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSSLGKEKDCKEKDPKVSSAKEREKEAKASGGFGKESKDRESKTKGKEAKDGKKDSSSA
QPGVAFSVDNTIKRPNPAPGARKKSSNAEVIKELNKCREENSVRLDLAKRSIHLLPSSIK
ELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDTLGNLKQLRMVDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIP
RTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYAL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPED
VSGLVSLEVLVLSNNLLRNLPHGIGNLRKLRELDLEENKLELLPNEIAYLRELQRLILTN
NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC
SKLSIMSIENCPLSTLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtcttggaaaagaaaaagattgtaaggagaaagatcccaaagtgtcttca
gcaaaagaaagggagaaagaggccaaggcctctggtggatttgggaaagaaagtaaagac
agagaatctaagaccaaagggaaggaagccaaagatgggaagaaggactctagtagtgca
cagccaggtgtggctttttcagtagacaacacaataaaacggcccaacccagctccaggt
gcccgtaaaaaatccagtaatgctgaggtgatcaaagagctaaacaaatgtcgggaagaa
aattcagtacgtttggacttggctaagaggtctatacatctgctcccatcatctatcaaa
gagttaacccagttgacggaactttatttatatggaaataagttacagtcactacctgct
gaggtaggctgtcttgtgaatctggaaactttggccttaagtgagaactcactcaccagc
cttccggacactcttggtaacttgaaacagcttcgtatggttgatctacggcataacaaa
ttgagagagattcctcctgtggtgtataggctaacttcccttactacactttatctgcgc
tttaatcgtatcacttcagtggaaaaggatatcaagaacttgtccaatctcaccatgcta
agcatacgggagaacaaaatcaaacaactccctgcagaaattggtgagctgtgtaacctc
ataacgctggatgtagcccacaatcagcttgaacatcttccaaaggagattggcaattgc
acacagatcaccaaacttgatctacagcacaatgaacttttggaccttccagacactata
ggaaatctatctactttgaaaagccttggtctgagatataaccgtctctcagcaataccc
aggactctagcacagtgcagtaaacttgatgaattaaatttggaaaataacattatttct
actttgccagagggtctcttatccagtcttgtgaatctgactagtctaactctggcaagg
aactgttttcaatcttaccctgtgggtggcccttcacagttctctactatctacgctctc
aatatggaacataaccgcattaacaaaattccttttggaattttttctagagcaaaagta
ttaagtaagctgaacatgaaggacaatcagctgacatcacttcccctggattttgggaca
tggaccagtatggtggaactcaatttagctacaaatcagctcaacaaaattcccgaggat
gtatctggacttgtttctcttgaggttcttgttttgtcaaataatcttctaagaaacctc
ccacatggcattggaaatttgaggaaactgagagaattggatctagaggaaaataagctg
gaattgttgccaaatgaaatagcataccttagggagctacagaggctgatcctaacaaat
aatcaattgagcactcttcctagaggaattggtcaccttatcaatctgacacatcttggg
ctgggagaaaactttcttacacaacttcctgaagaaattggtacactggaaaatctggaa
gaactgtatctaaatgataatccacatctaaacagccttccttttgaactggctctttgc
agcaaattatctataatgagcattgagaactgtccgctcagtacccttccagctcagatt
gttgcaggtggaccttcctttatcatccagtttctcaaaatgcaaggaccatatcgagcc
atggtctga
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