Thamnophis sirtalis (common garter snake): 106548331
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Entry
106548331 CDS
T06107
Symbol
RPRD1A
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106548331 (RPRD1A)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106548331 (RPRD1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CREPT
CID
CTK3
GlutR_N
Motif
Other DBs
NCBI-GeneID:
106548331
NCBI-ProteinID:
XP_013921156
UniProt:
A0A6I9Y344
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MSAFSESALERKLSELSNSQQSVQTLSLWLIHHRKHSPLIVTVWERELRKAKPNRKLTFL
YLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDDSCKKHLGRVLSIWEERSVYEND
ILEQLRQALYGNPRKRTYEQIKIEDNSSAQSSPSDPPQTMDLIRSLQELENAASGDAAVH
QRIASIPLEVQDATLLNRITDKESGEQLSKMVDDACMLLADYNGRLAAEIDDRKQLNRML
SDFLRCQKEILSEKEQTLEEHKRKLTGVSQVRKELKSRIQSLPDLSRLPNVTGSQVHLPF
AGDVYSDE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttctcagaatcggcgctggagaggaaattgtcggagctaagcaattctcag
caaagtgtccagacactgagtctgtggcttatccatcaccgaaagcattcgccgctcatt
gtcaccgtctgggagcgcgagctgcgcaaagccaaaccaaacaggaagctaacttttttg
tatctggctaatgatgtcattcaaaatagcaaaagaaaagggccggagtttacaaaagat
tttgcacctgtcatagtggaagcttttaagcatgtatccagtgaaactgatgatagttgc
aaaaagcatctgggccgtgtgctgtctatttgggaagaaaggtctgtttatgaaaatgat
atattggaacaacttaggcaagctttgtatggaaacccaaggaaacgcacatatgagcag
ataaagatcgaagataactcttcagcacaaagctctccatctgatcctccccagacaatg
gatctgataagatcattacaagaattggaaaatgcagcctctggagatgcagcagttcat
cagaggatagcctcaatacctctagaagttcaagatgcaactttgcttaacagaatcaca
gacaaagaatcaggagaacagctttccaagatggtagatgatgcatgtatgttgctggcg
gattacaatggcaggttggcagctgaaattgatgatagaaaacaactaaatcggatgttg
tcagattttttacgatgccaaaaagaaatcctgtcagagaaagaacaaacattggaagaa
cacaagcgcaaattaactggtgtgtcccaggtacggaaagaactcaagtcacgcatccag
agtctccctgatctgtcaaggctccccaatgttacaggaagtcaagtgcatctaccattt
gcaggggatgtctatagtgatgagtga
DBGET
integrated database retrieval system
