Thamnophis sirtalis (common garter snake): 106548349
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Entry
106548349 CDS
T06107
Symbol
RNF41
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1 isoform X1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106548349 (RNF41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106548349 (RNF41)
04121 Ubiquitin system [BR:
tsr04121
]
106548349 (RNF41)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106548349 (RNF41)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106548349 (RNF41)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106548349 (RNF41)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
106548349 (RNF41)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106548349 (RNF41)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
106548349 (RNF41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_6
zf-C3HC4_4
zf-rbx1
zf-RING_UBOX
zf-Nse
zf-C3HC4_3
zf-RING_5
U-box
Sina_ZnF
zf-ANAPC11
zf-RING_10
Trimer_CC
Sos7
zf-TRAF
LXG
zf-RING_16
NBAS_11th
DUF641
Rootletin
SlyX
DUF4795
BLOC1_2
zf-CCCH_6
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
106548349
NCBI-ProteinID:
XP_013921181
UniProt:
A0A6I9Y359
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MGYDVARFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVV
TVAHLRPVPRIMRNMLSKLQITCDNAVFGCTAVVRLDNLMSHLNDCEHNPKRPVTCEQGC
GLEMPKDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAI
RSVNPNLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPT
SIINELIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEEM
VLEPGLVMIFAHGVEEI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggggtatgatgtagcacgttttcaaggggatgttgatgaagatcttatttgccccatc
tgcagtggggttttggaggagccagtgcaggcacctcattgtgagcacgctttttgcaat
gcctgtatcacccagtggttctcccaacagcagacgtgccccgtcgatcgaagcgtcgtg
actgtggctcacctgcgccctgttccccggatcatgcgtaatatgctatctaagctgcaa
atcacgtgtgacaacgctgtttttggttgcactgctgtagtgcggcttgacaacctgatg
tctcacctcaatgactgcgaacacaatccaaagcggcctgtgacctgtgaacagggatgc
ggcttggaaatgcccaaagacgaattgccgaatcataactgtataaaacatttacggtca
gtagtgcagcagcaacagacaagaatagctgaattggaaaagacgtctgcagaacataag
catcaattagcagagcagaaacgggacatacagttgttaaaagcatacatgcgagcgata
cgtagtgtcaatcccaacctgcagaatttggaggaaactattgaatataatgaaatcctt
gagtgggtgaattccttgcagccagcccgggtaacccgatggggtggtatgatctctaca
ccagatgctgtactccaagctgtaatcaagcgttccttggtggaaagcggctgccccaca
tccatcatcaatgaattgattgaaaatgcccatgaacggaactggccccaaggcctggcc
accctagaaactcgccagatgaaccgacgctattatgaaaactatgtggccaaacgcatc
ccaggcaaacaagctgtggttgtgatggcctgtgagaatcagcacatgggagaggagatg
gtgctagagccaggcctggtgatgatatttgcacatggagtggaggaaatttaa
DBGET
integrated database retrieval system
