KEGG   Thamnophis sirtalis (common garter snake): 106548480
Entry
106548480         CDS       T06107                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106548480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsr03041]
    106548480
Spliceosome [BR:tsr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106548480
 Complex B
    106548480
SSDB
Motif
Pfam: RRM_1 Transformer RRM_occluded CDC45
Other DBs
NCBI-GeneID: 106548480
NCBI-ProteinID: XP_013921332
UniProt: A0A6I9YB51
LinkDB
Position
Unknown
AA seq 243 aa
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRERRNRDQRSVSRDRRR
RRSPLSLSGPLTRSPRHEKKKKIRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTM
TPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNP
VLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVY
VPG
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtcggacttcgacgagtttgagcggcagctaaatgaaaacaaacaggaacgtgataaa
gagaatcgtcatcgtaaacgcagccacagtcgttcacggagtcgtgacaggaaacgtcgc
agtcgtagccgtgagaggcgcaacagggatcagcgcagtgtttcacgagatcgcaggagg
cgcagatctcctctgagcctgtcaggtcctctaacccgatctcctcggcatgagaagaag
aagaaaatccgcaagtattgggatgtccctcctccaggttttgagcacattacacccatg
cagtataaagccatgcaggctgcgggacaaattccagctacagccctactaccaaccatg
actccagatgggctggcagtaacacctacacctgtgcctgtagtcggcagccaaatgacg
cgacaagctcgacgtctctatgttggcaatatcccttttggaatcactgaggaagcaatg
atggatttcttcaatgcccagatgcgccttggtggccttactcaggctcccggtaatcct
gtcttggctgtgcaaattaaccaggacaagaacttcgcttttctggagttccgttctgtg
gatgaaacaacacaggccatggcttttgatgggatcattttccagggacaatcactgaag
atcagacgcccccatgattatcaaccacttcctggcatgtctgaaaacccatcagtttat
gtgccaggt

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