Thamnophis sirtalis (common garter snake): 106548512
Help
Entry
106548512 CDS
T06107
Symbol
XBP1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106548512 (XBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106548512 (XBP1)
04131 Membrane trafficking [BR:
tsr04131
]
106548512 (XBP1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
106548512 (XBP1)
Membrane trafficking [BR:
tsr04131
]
Autophagy
ER-phagy
ER stress-related proteins
106548512 (XBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_2
bZIP_1
bZIP_Maf
Cnn_1N
CENP-H
Motif
Other DBs
NCBI-GeneID:
106548512
NCBI-ProteinID:
XP_013921367
UniProt:
A0A6I9YB81
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MAPLPGPAAPPRLLLLPAASTAPAAAPGAPSPSPPPRKRQRLAHLSPEEKALRRKLKNRV
AAQSARDRKKARMGELERQAVELETENQRLLAENRRLRERAHSLARENHDLRLRLGLPAL
KVETQEETASIAPEGAETGSSESAALRLRVPPEGTGPAVFCLPSGGEEEEEEDEGGLLLG
TDSLASSDAESDLLLGILDSLDPDMFLHCSSSNSQATVFEKLQQEVCGEAAVPLPASPSP
SVGPPKQDAINELIRFDHEYTKPFFLEIISESATQEEVVVASPPLPAPICVKEEPADTLL
PDLGLCHLLSPDQRPPSLLDAASDSGYEGSPSPFSDLSSPVDADCSWEEAFAKELFPQLI
SV
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggctcctctgccgggtcctgcggcaccgccgcggctcctcctgctgccggccgcatcg
acggctccggcggccgctccaggggctccctcgccttccccgccgccccgtaagcggcag
cgcctggcgcacctcagcccggaagagaaggccctacgccggaagctgaagaaccgcgtg
gcggcgcagagcgctcgcgaccgcaagaaggcgcgcatgggcgagctggagcggcaggcc
gtcgagctggagaccgagaaccagaggctgctggcggagaaccggcgtctgcgggagcgc
gcccacagcttggcgcgcgagaatcacgatctgcgcctccgtctcgggcttcccgcgctg
aaggtggaaacgcaggaggagacagcaagcatcgcccctgagggggcagagaccgggtct
tctgagtccgcagcacttagactacgtgttcctccggaagggacaggcccagcagtcttc
tgcctccccagtgggggagaggaggaggaggaagaggacgaaggcggcctcctcctgggc
acagacagcctggcttcttcagatgctgagtctgatctcctcctgggcattttggacagt
ctggacccagacatgttcctgcactgcagcagcagcaactcccaggcaaccgtctttgag
aagctgcagcaggaagtgtgtggagaagcagctgttcccctacctgcctcccccagcccc
tccgtggggccacccaagcaagacgccattaatgaactgatccgctttgatcacgaatac
accaagccgttcttcctggagatcatatctgagtcggccacccaggaggaagtagtggtg
gcttctcctcccctgccagcccccatctgtgtgaaggaggagcctgcagacacccttttg
cctgatctgggcctctgccacctgctctctccagaccagaggcctccctctctgctggat
gccgccagtgactcgggctacgaaggctcgccctccccgttcagcgacctgtcctctcct
gtggacgcagactgcagctgggaggaggcctttgccaaggagctgtttcctcagctgatc
agtgtgtga
DBGET
integrated database retrieval system
