Thamnophis sirtalis (common garter snake): 106548617
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Entry
106548617 CDS
T06107
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106548617 (ABCE1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
106548617 (ABCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
AAA_15
AAA_29
Fer4_6
RsgA_GTPase
VapE-like_dom
nSTAND3
NACHT
AAA_16
AAA_23
Fer4_10
Fer4_21
SRP54
Fer4_2
ORC-CDC6-like
TsaE
AAA_30
LdpA_Fe-S-bd
AAA_5
Fer4_16
Fer4_4
Fer4_7
AAA_19
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
106548617
NCBI-ProteinID:
XP_013921492
UniProt:
A0A6I9YBJ6
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTSQCKIAWISETLCIGCGI
CIKKCPFAALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGAILDRKDETGTQTIVCKQLDLSHLRERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAVTIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELSIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLTPDDKSEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KCTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKVNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaactaacaagaattgctattgtgaaccatgataaatgtaagcctaagaaa
tgtcgccaggaatgcaagaagagttgccctgtggttcgaatgggaaaattgtgcatagaa
gtaacatcacaatgcaaaatagcatggatttctgaaacattatgcattggttgcggtatt
tgtattaagaaatgtccttttgcagccttgtcaattgttaacttgcctagcaacctggag
aaagaaacaactcacagatattgtgccaatgccttcaaacttcacaggttgcctattcct
cgtcctggagaagtgcttggtttggttggaacaaatgggattggaaagtcaactgccttg
aaaatcttagcaggaaagcagaaaccaaatcttgggaaatatgatgacccccctgattgg
caagaaatcctgacatattttcgagggtctgagttgcagaactacttcacaaaaattttg
gaagatgatctcaaggccatcattaaacctcagtatgtggaccagatcccaaaagctgcg
aagggaacagtgggcgcaatattggacaggaaggatgaaactggtacccagaccattgta
tgtaaacagcttgatttatctcatctaagagaacgaaatgttgaagatctatccggagga
gaacttcagagatttgcttgtgctgttgtttgcattcagaaagctgatatcttcatgttc
gatgaaccttccagctacctggatgttaagcagcgtctgaaggctgctgttactattcga
tctctaataaatccagacagatatattattgtcgtagagcatgacctgagtgtcttagat
tatctctccgattttatctgctgcttgtatggtgtgccaagtgcttatggtgtcgtcaca
atgcctttcagcgtaagagaaggcataaatattttcttagatggttatgtcccaacagag
aacttaaggtttcgagatgcatcattagtttttaaagtggcagagacagctaacgaagaa
gaagttaaaaagatgtgtatgtataaatatcctggaatgaaaaaaaagatgggagagttt
gagctgtctatcgtagctggagaattcactgactctgagataatggtgatgttaggagaa
aatggaactggaaaaacaacattcattcggatgcttgcagggcgacttactccagatgat
aaaagtgaagtacctgttttaaatgttagctataagccacagaagatcagtccaaaatct
actggaagtgttcgtcagctacttcatgagaagattagagatgcttacacacatccacag
tttgtgactgatgtaatgaagcctttgcagattgaaaatatcattgatcaagaggtgcaa
actttatctggtggtgagttgcagagagttgctcttgctctttgtctcggaaagcccgct
gatgtctacctaattgatgaaccttccgcctacctggactcagagcaacgtctgatggct
gctagagttgtcaaacgtttcattcttcacgctaaaaaaactgcttttgtggtagagcat
gattttataatggccacctacctagcagatcgtgtcattgtcttcgatggaataccatcc
aagtgcacagtggcaaacagtcctcaaactcttctggctggtatgaataagtttttgtct
cagctggaaattactttcagaagagatccaaacaactatagaccaagaataaacaaagtc
aattcaatcaaggacgtggaacagaagaaaagtggaaattactttttcttggacgattaa
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